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. 1999 Dec;37(12):3828–3834. doi: 10.1128/jcm.37.12.3828-3834.1999

TABLE 2.

Identities of nucleotide sequences and amino acid sequences shown in Fig. 1

Strain % Identitya
Ch.1 Ch.2 Ch.3 CHb CXj Pk Ind532 Np Br Ind My Egy Chad swUS US-1 swT74 T821 Mx
Ch.1 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 98.4 98.4 95.1 95.1 90.2 91.8 83.3
Ch.2 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 98.4 98.4 95.1 95.1 90.2 91.8 83.3
Ch.3 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 100.0 98.4 98.4 95.1 95.1 90.2 91.8 83.3
CHb 99.5 99.5 99.5 100.0 100.0 100.0 100.0 100.0 100.0 100.0 98.4 98.4 95.1 95.1 90.2 91.8 83.3
CXj 99.5 99.5 99.5 100.0 100.0 100.0 100.0 100.0 100.0 100.0 98.4 98.4 95.1 95.1 90.2 91.8 83.3
Pk 98.4 98.4 98.4 98.9 98.9 100.0 100.0 100.0 100.0 100.0 98.4 98.4 95.1 95.1 90.2 91.8 83.3
Ind532 92.4 92.4 92.4 93.0 93.0 93.0 100.0 100.0 100.0 100.0 98.4 98.4 95.1 95.1 90.2 91.8 83.3
Np 93.5 93.5 93.5 94.1 94.1 94.1 98.9 100.0 100.0 100.0 98.4 98.4 95.1 95.1 90.2 91.8 83.3
Br 93.5 93.5 93.5 94.1 94.1 93.0 98.9 98.9 100.0 100.0 98.4 98.4 95.1 95.1 90.2 91.8 83.3
Ind 92.4 92.4 92.4 93.0 93.0 91.9 97.8 96.8 97.8 100.0 98.4 98.4 95.1 95.1 90.2 91.8 83.3
My 94.6 94.6 94.6 94.1 94.1 93.0 97.8 97.8 98.9 97.8 98.4 98.4 95.1 95.1 90.2 91.8 83.3
Egy 87.0 87.0 87.0 87.5 87.6 86.5 87.6 87.6 88.6 88.6 88.6 100.0 93.4 93.4 88.5 90.2 81.7
Chad 89.2 89.2 89.2 89.7 89.7 88.6 88.1 88.1 89.2 89.2 89.2 96.8 93.4 93.4 88.5 90.2 81.7
swUS 78.4 78.4 78.4 78.4 78.4 78.9 74.6 75.1 75.1 74.6 75.7 74.6 76.8 100.0 95.1 96.7 88.3
US-1 80.0 80.0 80.0 80.0 80.0 80.5 76.8 77.3 77.3 76.8 77.8 75.7 77.3 92.4 95.1 96.7 88.3
swT74 69.2 69.2 69.2 69.7 69.7 70.3 68.6 69.2 69.2 68.6 69.2 67.0 68.6 80.0 77.3 98.4 88.3
T821 72.4 72.4 72.4 73.0 73.0 73.5 71.9 72.4 72.4 71.9 72.4 70.3 71.9 81.6 78.4 97.3 86.7
Mx 70.9 70.9 70.9 70.9 70.9 70.3 68.7 69.8 69.8 69.2 70.9 71.9 69.2 69.8 66.5 71.4 70.3
a

The percent identities below the diagonal space are for nucleotide sequences, and those above the diagonal space are for amino acid sequences.