Table 3.
Summary of identified miRNAs in molluscs
| Species | miRNA no. | Library source | Sequencing technology or method | Function | Reference |
|---|---|---|---|---|---|
| C. farreri | 68 | Haemocytes | Illumina Genome Analyser | Immune response | [103] |
| C. gigas | 100 | Different developmental stages and tissues | Illumina HiSeq 2000 | Biological process | [25] |
| C. gigas | 199 | Haemocytes | Illumina HiSeq 2000 | Immune response | [74] |
| C. gigas | 202 | Gill | Illumina HiSeq 2000 | Osmotic stress response | [81] |
| C. gigas | 331 | Haemocytes | Ion Torrent Proton sequencer | Immune response | [104] |
| C. hongkongensis | 87 | Gill | Illumina HiSeq 2000 | Osmotic stress response | [81] |
| C. hongkongensis | 113 | Testis and ovary | Illumina HiSeq 2000 | Gonad differentiation | [105] |
| Hyriopsis cumingii | 170 | Mantle exosome | Illumina HiSeq 4000 | Nacre colour formation | [106] |
| Littorina littorea | 7 | Hepatopancreas and foot muscle | RT-PCR | Extreme Environment stress | [87] |
| M. galloprovincialis | 137 | Soft tissues | BGISEQ-500 sequencing | Biological processes | [107] |
| Ostrea edulis | 120a | Haemocytes | Commercial microarray | Immune response | [73] |
| Patella vulgata | 45b | Male gonad | Illumina HiSeq 2000 | microRNA evolution | [59] |
| P. fucata | 228 | Adductor muscle, gill, mantle and gonad | IonTorrent Proton Sequencer | Biomineralization process | [26] |
| P.martensii | 258 | Mixed tissues library | Solexa deep sequencing platform | Biomineralization understanding | [108] |
| P. martensii | 30b | Pearl sac | Illumina Hiseq2000 | Biomineralization understanding | [60] |
| T. granosa | 254 | Haemocytes | Illumina HiSeq 2000 | Heavy metal stress response | [46] |
| A.californica | 170 | Isolated CNS and whole body with CNS removed | 454 sequencing platform | Long-term plasticity of synapses in Aplysia mature nervous system | [79] |
| Haliotis midae | 40 | Mixed tissues library | Illumina Genome Analyser II and 454 GS FLX platform | Immune and stress response | [109] |
| H. rufescens | 53 | Foot, and visceral mass+larvae | 454 sequencing platform | miRNA evolution | [13] |
| L. gigantea | 63 | - | miRBase 22.0 | miRNA evolution | [10] |
| Lymnaea stagnalis | 385 | Central nervous system | Illumina GAIIx platform | Neuronal regeneration | [89] |
| Otala lactea | 75 c | Foot muscle | RT-PCR | Estivation responsive | [88] |
| Dosidicus gigas | 39 c | Brain, mantle muscle, and branchial heart | RT-PCR | Hypoxia-induced metabolic suppression | [84] |
a: Differently expressed miRNAs; b: Computationally predicted miRNA; c: Conserved miRNAs from invertebrates.