Table 6.
Gene expression profiling of glucocorticoid (GC) producing and target tissue types. (CS: Cushing syndrome, cortisol-producing adrenal adenoma; dex: dexamethasone; #: the munber of Controls).
Sample Type | Experiment | # of Control | # of Dex Treatment/GC Affected | DataSet [Refs] | Platform |
---|---|---|---|---|---|
Human tissue | bone tissue biopsies from CS patients, before vs. 3 months after surgery | 9 | 9 | GSE30159 [53] | Affymetrix Human Genome U133 Plus 2.0 Array |
Human tissue | adrenal cortex, normal tissue vs. GC secreting adenoma | 4 | 4 | GSE14922 [51] | Agilent-014850 Whole Human Genome Microarray 4 × 44 K G4112F |
In vitro human cell line | adrenocortical cancer (H295R) cell line, control vs. dex treatment | 3 | 3 | GSE64826 [52] | Affymetrix Human Gene 1.0 ST Array |
In vitro human primary cells | osteoblast cell, control vs. dex | 6 | 3 | GSE21727 [54] | Illumina humanRef-8 v2.0 expression bead chip |
In vitro human primary cells | osteoblast-like cells (HObs) from bone explant, control vs. dex treatment | 6 | 3 | GSE10311 [55] | Affymetrix Human Genome U133 Plus 2.0 Array |
In vitro human primary cells | synovial fibroblasts, control or dex treatment | 6 | 3 | GSE37520 [56] | Applied Biosystems/University of Birmingham Human RT-PCR array (custom made) |
In vitro human primary cells | abdominal subcutaneous adipose cells, control vs. dex treatment | 3 | 3 | GSE88966 [57] | Affymetrix Human Gene 1.0 ST Array |
In vitro human primary cells | abdominal omental adipose cells, control vs. dex treatment | 3 | 3 | GSE88966 [57] | Affymetrix Human Gene 1.0 ST Array |
In vitro human primary cells | epidermal keratinocytes, control vs. dex treatment | 2 | 2 | GSE26487 [58] | Affymetrix Human Genome U95 Version 2 Array |
German Landrace piglet tissue | 7-week old purebred piglet hippocampus tissue, control vs. im. dex treatment | 20 | 12 | Murani et al., 2021 [74] | TruSeqStranded mRNA sample preparation kit; HiSeq 2500 instrument |
German Landrace piglet tissue | 7-week old purebred piglet hypothalamus tissue, control vs. im. dex treatment | 20 | 12 | Murani et al., 2021 [74] | TruSeqStranded mRNA sample preparation kit; HiSeq 2500 instrument |