Table 6.
Differentially expressed miRNA-target pairs in response to P. brassicae (p < 0.05, |log2FC| > 1).
| miRNA | Log2FC | Target transcript | Gene ID | Log2FC | Symbol | Annotation |
|---|---|---|---|---|---|---|
| A. Int409R vs Mock409R | ||||||
| bna-miR169m | 1.41 | XM_013829031.2 | LOC106388859 | 1.52 | NFYA2 | PREDICTED: Brassica napus nuclear transcription factor Y subunit A-2-like |
| XM_013880479.2 | LOC106439112 | 1.65 | NFYA2 | PREDICTED: Brassica napus nuclear transcription factor Y subunit A-2-like | ||
| bna-miR169n | 2.37 | XM_013880479.2 | LOC106439112 | 1.65 | NFYA2 | PREDICTED: Brassica napus nuclear transcription factor Y subunit A-2-like |
| XM_013843872.2 | LOC106403032 | 1.16 | NFYA3 | PREDICTED: Brassica napus nuclear transcription factor Y subunit A-3-like | ||
| XM_013843696.2 | LOC106402883 | 1.36 | NFYA3 | PREDICTED: Brassica napus nuclear transcription factor Y subunit A-3 | ||
| XM_013846894.2 | LOC106406270 | 1.22 | NFYA3 | PREDICTED: Brassica napus nuclear transcription factor Y subunit A-3 -like | ||
| XM_013817829.2 | LOC106377560 | 1.17 | NFYA6 | PREDICTED: Brassica napus nuclear transcription factor Y subunit A-6 | ||
| XM_013794135.2 | LOC106354243 | 1.48 | NFYA3 | PREDICTED: Brassica napus nuclear transcription factor Y subunit A-3-like | ||
| bna-miR395d | −1.59 | XM_013893754.2 | LOC106451780 | −1.30 | APS1 | PREDICTED: Brassica napus ATP sulfurylase 1, chloroplastic-like |
| XM_013797400.2 | LOC106357712 | −1.15 | APS1 | PREDICTED: Brassica napus ATP sulfurylase 1, chloroplastic-like | ||
| NM_001315829.1 | LOC106410303 | 0.98 | APS4 | Brassica napus ATP sulfurylase 4, chloroplastic | ||
| XM_013888737.2 | LOC106446918 | 1.45 | / | PREDICTED: Brassica napus uncharacterized | ||
| XM_013820969.2 | BNAC04G40010D | 1.79 | / | PREDICTED: Brassica napus uncharacterized BNAC04G40010D | ||
| novel_147 | −1.97 | XM_013818148.2 | LOC106377933 | 2.84 | NAC076 | PREDICTED: Brassica napus NAC domain-containing protein 76-like |
| XM_013820748.2 | LOC106380909 | 3.15 | PNSL2 | PREDICTED: Brassica napus photosynthetic NDH subunit of lumenal location 2, chloroplastic-like | ||
| XM_013857207.2 | LOC106416345 | 2.75 | PNSL2 | PREDICTED: Brassica napus photosynthetic NDH subunit of lumenal location 2, chloroplastic-like | ||
| B. Int409S vs Mock409S | ||||||
| novel_1 | 1.36 | XM_013876125.2 | LOC106435262 | −1.42 | / | PREDICTED: Brassica napus uncharacterized protein At2g33490-like |
| XM_013887915.2 | LOC106446212 | −1.94 | / | PREDICTED: Brassica napus uncharacterized protein At2g33490-like | ||
| XM_022705170.1 | LOC106402738 | −1.22 | / | PREDICTED: Brassica napus uncharacterized protein At2g33490-like | ||
Bold letters indicate that target transcripts are negatively regulated by corresponding miRNAs.