TABLE 4.
Target | Category | Method | Sham-Veh | Impact-Veh | Impact-Ral5 | Impact-Ral10 |
IBA1 | M0 | qPCR | 100.0% | 74.7% | 51.2% | 124.5% |
MERTK | M0 | NanoString | 100.0% | 127.8% | 97.6% | 80.9% |
P2ry12 | M0 | qPCR/Nano | 100.0% | 292.4% | 92.7% | 154.0% |
SPARC | M0 | NanoString | 100.0% | 162.7% | 117.2% | 107.6% |
TGFβ | M0 | qPCR | 100.0% | 109.9% | 77.8% | 112.3% |
Tmem119 | M0 | qPCR/Nano | 100.0% | 145.5% | 89.6% | 71.5% |
| ||||||
CD16 | M1 | NanoString | 100.0% | 260.6% | 105.9% | 123.3% |
CD32 | M1 | qPCR/Nano | 100.0% | 192.3% | 93.3% | 116.3% |
CD86 | M1 | NanoString | 100.0% | 148.8% | 145.1% | 135.5% |
IFNγ | M1 | qPCR/Nano | 100.0% | 100.6% | 105.8% | 112.6% |
IL1β | M1 | qPCR/Nano | 100.0% | 190.7% | 133.4% | 216.5% |
IL6 | M1 | NanoString | 100.0% | 68.9% | 86.2% | 81.3% |
IL12p40 | M1 | NanoString | 100.0% | 128.7% | 157.7% | 146.3% |
iNOS | M1 | qPCR/Nano | 100.0% | 133.6% | 102.3% | 136.3% |
MCP-1 | M1 | NanoString | 100.0% | 73.9% | 90.8% | 91.6% |
Tlr2 | M1 | NanoString | 100.0% | 142.9% | 130.0% | 105.5% |
TNFα | M1 | qPCR | 100.0% | 44.6% | 42.9% | 128.3% |
| ||||||
Arg-1 | M2 | qPCR/Nano | 100.0% | 54.7% | 58.3% | 53.8% |
CD36 | M2 | NanoString | 100.0% | 82.3% | 70.9% | 59.5% |
CD206 | M2 | NanoString | 100.0% | 171.8% | 146.2% | 119.7% |
Fizz1 | M2 | NanoString | 100.0% | 184.6% | 151.8% | 166.3% |
IL4rα | M2 | NanoString | 100.0% | 90.2% | 104.8% | 83.9% |
IL10 | M2 | qPCR/Nano | 100.0% | 114.6% | 133.2% | 127.7% |
IL13 | M2 | NanoString | 100.0% | 126.1% | 156.7% | 149.3% |
Trem2 | M2 | qPCR/Nano | 100.0% | 84.7% | 95.3% | 100.9% |
Ym1 | M2 | qPCR/Nano | 100.0% | 126.5% | 114.3% | 184.8% |
| ||||||
All | M0 | qPCR/Nano | 100.0% | 152.2% | 87.7% | 108.5% |
All | M1 | qPCR/Nano | 100.0% | 135.1% | 108.5% | 126.7% |
All | M2 | qPCR/Nano | 100.0% | 115.1% | 114.6% | 116.2% |
All | M1/M2 | qPCR/Nano | 1.00 | 1.17 | 0.95 | 1.09 |
Expression was assessed 3 days after impact TBI. Expression levels for transcripts examined by both qPCR and NanoString were averaged. Data are expressed as a percentage compared to sham-vehicle mice.