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. 2021 Oct 29;15:701317. doi: 10.3389/fnins.2021.701317

TABLE 4.

Expression of microglial transcripts in retina.

Target Category Method Sham-Veh Impact-Veh Impact-Ral5 Impact-Ral10
IBA1 M0 qPCR 100.0% 74.7% 51.2% 124.5%
MERTK M0 NanoString 100.0% 127.8% 97.6% 80.9%
P2ry12 M0 qPCR/Nano 100.0% 292.4% 92.7% 154.0%
SPARC M0 NanoString 100.0% 162.7% 117.2% 107.6%
TGFβ M0 qPCR 100.0% 109.9% 77.8% 112.3%
Tmem119 M0 qPCR/Nano 100.0% 145.5% 89.6% 71.5%

CD16 M1 NanoString 100.0% 260.6% 105.9% 123.3%
CD32 M1 qPCR/Nano 100.0% 192.3% 93.3% 116.3%
CD86 M1 NanoString 100.0% 148.8% 145.1% 135.5%
IFNγ M1 qPCR/Nano 100.0% 100.6% 105.8% 112.6%
IL1β M1 qPCR/Nano 100.0% 190.7% 133.4% 216.5%
IL6 M1 NanoString 100.0% 68.9% 86.2% 81.3%
IL12p40 M1 NanoString 100.0% 128.7% 157.7% 146.3%
iNOS M1 qPCR/Nano 100.0% 133.6% 102.3% 136.3%
MCP-1 M1 NanoString 100.0% 73.9% 90.8% 91.6%
Tlr2 M1 NanoString 100.0% 142.9% 130.0% 105.5%
TNFα M1 qPCR 100.0% 44.6% 42.9% 128.3%

Arg-1 M2 qPCR/Nano 100.0% 54.7% 58.3% 53.8%
CD36 M2 NanoString 100.0% 82.3% 70.9% 59.5%
CD206 M2 NanoString 100.0% 171.8% 146.2% 119.7%
Fizz1 M2 NanoString 100.0% 184.6% 151.8% 166.3%
IL4rα M2 NanoString 100.0% 90.2% 104.8% 83.9%
IL10 M2 qPCR/Nano 100.0% 114.6% 133.2% 127.7%
IL13 M2 NanoString 100.0% 126.1% 156.7% 149.3%
Trem2 M2 qPCR/Nano 100.0% 84.7% 95.3% 100.9%
Ym1 M2 qPCR/Nano 100.0% 126.5% 114.3% 184.8%

All M0 qPCR/Nano 100.0% 152.2% 87.7% 108.5%
All M1 qPCR/Nano 100.0% 135.1% 108.5% 126.7%
All M2 qPCR/Nano 100.0% 115.1% 114.6% 116.2%
All M1/M2 qPCR/Nano 1.00 1.17 0.95 1.09

Expression was assessed 3 days after impact TBI. Expression levels for transcripts examined by both qPCR and NanoString were averaged. Data are expressed as a percentage compared to sham-vehicle mice.