Table 1.
GO and KEGG pathway analysis results for differentially expressed RBPs in 3 critical modules.
| MCODE | Processes or pathways | P value |
|---|---|---|
| GO | ||
| Module 1 | Ribosome biogenesis | 3.60E-79 |
| rRNA metabolic process | 7.92E-78 | |
| rRNA processing | 1.56E-76 | |
| ncRNA processing | 2.71E-73 | |
| Preribosome | 1.39E-57 | |
| Module 2 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | 2.30E-28 |
| mRNA splicing, via spliceosome | 2.30E-28 | |
| RNA splicing, via transesterification reactions | 2.70E-28 | |
| RNA splicing | 1.73E-26 | |
| Catalytic step 2 spliceosome | 3.34E-24 | |
| Module 3 | Translation factor activity, RNA binding | 5.06E-13 |
| Cytoplasmic translational initiation | 6.34E-11 | |
| Translational initiation | 1.20E-10 | |
| Cytoplasmic translation | 1.56E-10 | |
| Translation initiation factor activity | 6.93E-10 | |
| KEGG | ||
| Module 1 | Ribosome biogenesis in eukaryotes | 2.89E-36 |
| Module 2 | Spliceosome | 1.19E-15 |
| mRNA surveillance pathway | 3.99E-09 | |
| RNA transport | 8.53E-06 | |
| Module 3 | RNA transport | 2.41E-13 |
| Legionellosis | 0.003 | |
| Leishmaniasis | 0.005 | |
| Spliceosome | 0.02 | |
| Ribosome | 0.02 |