Table 3.
Gene contents in the chloroplast genomes of four Bulbophyllum species.
| Group of genes | Gene names |
|---|---|
| 1 Photosystem I | psaA, psaB, psaC, psaI, psaJ |
| 2 Photosystem II | psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, psbK, psbL, psbM, psbN, psbT, psbZ |
| 3 Cytochrome b/f complex | petA, petBa, petDa, petG, petL, petN |
| 4 ATP synthase | atpA, atpB, atpE, atpFa, atpH, atpI |
| 5 NADH dehydrogenase | ndhAa, ndhBa(× 2), ndhC, ndhD, ndhE, ndhF, ndhG, ndhH, ndhI, ndhJ, ndhK |
| 6 RubisCO large subunit | rbcL |
| 7 RNA polymerase | rpoA, rpoB, rpoC1a, rpoC2 |
| 8 Ribosomal proteins (SSU) | rps2, rps3, rps4, rps7 (× 2), rps8, rps11, rps12b(× 2), rps14, rps15, rps16a, rps18, rps19 (× 2) |
| 9 Ribosomal proteins (LSU) | rpl2a (× 2), rpl14, rpl16a, rpl20, rpl22, rpl23 (× 2), rpl32, rpl33, rpl36 |
| 10 Other genes | clpPb, matK, accD, ccsA, infA, cemA |
| 11 Proteins of unknown function | ycf1, ycf2 (× 2), ycf3b, ycf4, ycf15 (× 2) |
| 12 Ribosomal RNAs | rrn4.5 (× 2), rrn5S (× 2), rrn16S (× 2), rrn23S (× 2) |
| 13 Transfer RNAs | trnA-UGCa(× 2), trnC-GCA, trnD-GUC,trnE-UUC, trnF-GAA, trnG-GCC, trnG-UCCa, trnH-GUG (× 2), trnI-CAU( × 2), trnI-GAUa(× 2), trnK-UUUa, trnL-CAA (× 2), trnL-UAAa, trnL-UAG, trnM-CAU, trnN-GUU(× 2), trnP-UGG, trnQ-UUG, trnR-ACG (× 2), trnR-UCU, trnS-GCU, trnS-GGA, trnS-UGA, trnT-GGU, trnT-UGU, trnV-GAC (× 2), trnV-UACa, trnW-CCA, trnY-GUA, trnfM-CAU |
a
Gene containing one intron.
b
Gene containing two introns, (×2) Gene has two copies.