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. 2021 Nov 1;12:739621. doi: 10.3389/fmicb.2021.739621

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Copyright © 2021 Yan, Zhang, Li, Wang, Zhang, Jin, Zhang, Lv, Xiao, Sun, Li, Cui, Li, Ma, Wang, Tian, Duan, Xin, Mao and Ma.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Overview of the cultivated bacteria from bile specimens. (A) Pie plot shows the composition of 138 bacterial colonies. (B) Venn diagram of the distribution of isolates in the four bile samples. (C) Phylogenetic tree of 35 whole-genome sequenced isolates. Color represents the genus assignment of the isolates.