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. 2021 Nov 15;16(11):e0258645. doi: 10.1371/journal.pone.0258645

Table 10. List of SARS-CoV-2 proteins that were predicted as common and overlapping B- and T- cell epitopes.

SARS-CoV-2 protein Name of epitope Predicted epitope of SARS-CoV-2 Length Antigenicity by VexiJen (T = 0.4) Allergeicity by AllerTope v. 2.0 Agadir Score Conservancy analysis by IEDB tool Experimentally verified epitopes / ViPR reference
SARS-CoV-2 SARS-CoV
Spike (S) Linear and conformational B-cell epitopes 1253-CCKFDEDDSEPVLKGVKLHYT-1273 21 Antigen (0.9101) Non-allergen 0.26 94.86% (166/175) 83.74% (273/326) (IEDB-ID: 6476) [59]
Linear B-cell epitopes and MHC I 403-RGDEVRQIAPGQTGKIADYNYKLPD-427 25 Antigen (1.0356) Non-allergen 0.45 100.00% (175/175) 0.00% (0/326) -
437-NSNNLDSKVGGNYNYLYRLFRKSNL-461 25 Antigen (0.4015) Non-allergen 4.42 100.00% (175/175) 0.00% (0/326) (MHC I, IEDB-ID: 1074979) [59]
Nucleocapsid (N) Linear and conformational B-cell epitopes and MHC I 366-TEPKKDKKKKADETQALPQRQKKQQTVTL-394 29 Antigen (0.5248) Non-allergen 0.63 100.00% (185/185) 0.00% (0/301) -
Linear B-cell epitopes and MHC I 173-AEGSRGGSQASSRSSSRS-190 18 Antigen (0.8081) Non-allergen 0.21 99.46% (184/185) 79.73% (240/301) (B-cell, IEDB-ID: 22481) [59]
227-LNQLESKMSGKGQQQQGQTVTKKSAAEASKKPRQKRTATK-266 40 Antigen (0.5387) Non-allergen 1.9 100.00% (185/185) 0.00% (0/301) (B-cell, IEDB-ID: 31692) [59]
Membrane (M) Linear and conformational B-cell epitopes and MHC I 160-DIKDLPKEITVATSRTLSYYKLG-182 23 Antigen (0.7442) Non-allergen 0.31 98.24% (167/170) 79.48% (213/268) (B-cell, IEDB-ID: 48052) [59]
Envelope (E) Linear and conformational B-cell epitopes 57-YVYSRVKNLNSSRVPDLL-75 19 Antigen (0.565) Non-allergen 0.2 100.00% (177/177) 0.00% (0/245) -