TABLE 1.
Comparison of metabolite levels among the three groups on relative integrals calculated from 1D 1H-NMR spectra of TNBC patients’ serum samples.
Mean ± SEM | Pairwise comparisons of Kruskal–Wallis test | |||||
---|---|---|---|---|---|---|
pSD | pPR | pCR | pPR vs. pSD | pPR vs. pCR | pCR vs. pSD | |
2-Hydroxybutyric acid | 1.859 ± 0.052 | 1.877 ± 0.059 | 1.827 ± 0.124 | 0.656 | 0.497 | 0.638 |
2-Hydroxyisovaleric acid | 0.612 ± 0.028 | 0.558 ± 0.028 | 0.540 ± 0.045 | 0.012 | 0.573 | 0.019 |
Isocaproic acid | 0.067 ± 0.014 | 0.063 ± 0.016 | 0.100 ± 0.045 | 0.703 | 0.139 | 0.215 |
3-Methyl-2-oxovaleric acid | 0.690 ± 0.023 | 0.662 ± 0.016 | 0.636 ± 0.024 | 0.058 | 0.092 | 0.005 |
Isovaleric acid | 0.454 ± 0.046 | 0.489 ± 0.042 | 0.385 ± 0.090 | 0.279 | 0.068 | 0.212 |
Valine | 0.066 ± 0.016 | 0.106 ± 0.018 | 0.162 ± 0.038 | 0.002 | 0.024 | 0.001 |
Isoleucine | 0.326 ± 0.023 | 0.280 ± 0.021 | 0.317 ± 0.055 | 0.006 | 0.247 | 0.794 |
Leucine | 1.355 ± 0.032 | 1.421 ± 0.057 | 1.544 ± 0.184 | 0.058 | 0.247 | 0.089 |
2-Aminobutanoic acid | 0.450 ± 0.067 | 0.385 ± 0.073 | 0.188 ± 0.072 | 0.204 | 0.001 | 0.000 |
2-Oxoisocaproate | 0.264 ± 0.016 | 0.257 ± 0.014 | 0.284 ± 0.049 | 0.507 | 0.327 | 0.465 |
Isobutyric acid | 0.034 ± 0.007 | 0.033 ± 0.006 | 0.025 ± 0.011 | 0.812 | 0.194 | 0.157 |
Propionic acid | 0.107 ± 0.004 | 0.098 ± 0.004 | 0.102 ± 0.007 | 0.006 | 0.342 | 0.348 |
Isopropanol | 0.079 ± 0.007 | 0.075 ± 0.008 | 0.081 ± 0.005 | 0.427 | 0.264 | 0.683 |
Ethanol | 0.151 ± 0.008 | 0.140 ± 0.006 | 0.133 ± 0.013 | 0.045 | 0.354 | 0.027 |
3-Hydroxybutyric acid | 0.798 ± 0.118 | 0.753 ± 0.082 | 0.692 ± 0.142 | 0.543 | 0.488 | 0.278 |
Formic acid | 0.005 ± 0.001 | 0.005 ± 0.001 | 0.006 ± 0.001 | 0.285 | 0.468 | 0.198 |
Hypoxanthine | 0.006 ± 0.002 | 0.005 ± 0.002 | 0.004 ± 0.003 | 0.526 | 0.598 | 0.347 |
τ-Methylhistidine | 0.075 ± 0.035 | 0.123 ± 0.030 | 0.169 ± 0.070 | 0.045 | 0.248 | 0.036 |
Histidine | 0.584 ± 0.032 | 0.592 ± 0.037 | 0.530 ± 0.076 | 0.721 | 0.187 | 0.224 |
Hippuric acid | 0.063 ± 0.013 | 0.080 ± 0.016 | 0.075 ± 0.030 | 0.123 | 0.765 | 0.488 |
Phenylalanine | 0.174 ± 0.013 | 0.173 ± 0.025 | 0.218 ± 0.035 | 0.931 | 0.058 | 0.047 |
Tyrosine | 0.214 ± 0.031 | 0.215 ± 0.024 | 0.216 ± 0.044 | 0.955 | 0.964 | 0.933 |
π-Methylhistidine | 0.532 ± 0.018 | 0.578 ± 0.025 | 0.646 ± 0.074 | 0.004 | 0.132 | 0.019 |
Threonine | 0.298 ± 0.023 | 0.261 ± 0.021 | 0.296 ± 0.055 | 0.023 | 0.277 | 0.965 |
Lactic acid | 2.844 ± 0.300 | 3.363 ± 0.420 | 4.821 ± 0.778 | 0.044 | 0.007 | 0.001 |
3-Hydroxyisovaleric acid | 0.229 ± 0.018 | 0.205 ± 0.017 | 0.250 ± 0.043 | 0.065 | 0.086 | 0.412 |
Proline | 3.285 ± 0.140 | 2.978 ± 0.130 | 2.995 ± 0.161 | 0.002 | 0.857 | 0.013 |
Pyroglutamic acid | 0.362 ± 0.042 | 0.349 ± 0.028 | 0.375 ± 0.041 | 0.601 | 0.335 | 0.689 |
Glucose | 6.449 ± 0.591 | 7.571 ± 1.089 | 7.970 ± 1.421 | 0.042 | 0.678 | 0.043 |
Serine | 0.997 ± 0.044 | 1.070 ± 0.081 | 1.055 ± 0.087 | 0.125 | 0.812 | 0.267 |
Glycerol | 0.300 ± 0.047 | 0.262 ± 0.039 | 0.273 ± 0.086 | 0.244 | 0.827 | 0.627 |
Glycine | 0.198 ± 0.025 | 0.225 ± 0.030 | 0.225 ± 0.050 | 0.168 | 0.692 | 0.364 |
Arginine | 3.505 ± 0.094 | 3.582 ± 0.110 | 3.564 ± 0.234 | 0.303 | 0.848 | 0.666 |
Lysine | 3.229 ± 0.112 | 3.341 ± 0.136 | 3.354 ± 0.243 | 0.221 | 0.937 | 0.381 |
2-Oxoglutaric acid | 0.010 ± 0.004 | 0.009 ± 0.003 | 0.013 ± 0.016 | 0.624 | 0.627 | 0.726 |
Alanine | 0.242 ± 0.048 | 0.300 ± 0.050 | 0.513 ± 0.085 | 0.111 | 0.001 | 0.000 |
Acetic acid | 0.088 ± 0.006 | 0.098 ± 0.007 | 0.094 ± 0.011 | 0.062 | 0.635 | 0.346 |
Acetoacetate | 0.012 ± 0.006 | 0.032 ± 0.012 | 0.023 ± 0.011 | 0.005 | 0.327 | 0.134 |
Glutamic acid | 0.384 ± 0.068 | 0.402 ± 0.064 | 0.512 ± 0.072 | 0.678 | 0.037 | 0.017 |
Glutamine | 0.863 ± 0.080 | 0.828 ± 0.092 | 0.936 ± 0.158 | 0.603 | 0.287 | 0.448 |
Pyruvate | 0.053 ± 0.003 | 0.053 ± 0.004 | 0.062 ± 0.008 | 0.855 | 0.081 | 0.065 |
N-Acetylglycine | 0.132 ± 0.009 | 0.119 ± 0.014 | 0.108 ± 0.021 | 0.131 | 0.414 | 0.075 |
Citric acid | 0.006 ± 0.002 | 0.008 ± 0.002 | 0.016 ± 0.008 | 0.196 | 0.128 | 0.043 |
Methionine | 0.199 ± 0.008 | 0.203 ± 0.010 | 0.211 ± 0.017 | 0.531 | 0.415 | 0.232 |
Acetone | 0.018 ± 0.001 | 0.018 ± 0.002 | 0.020 ± 0.002 | 0.355 | 0.063 | 0.167 |
Aspartic acid | 0.136 ± 0.018 | 0.139 ± 0.014 | 0.155 ± 0.013 | 0.823 | 0.135 | 0.121 |
Methylguanidine | 0.024 ± 0.002 | 0.022 ± 0.003 | 0.026 ± 0.006 | 0.302 | 0.223 | 0.441 |
Asparagine | 1.565 ± 0.112 | 1.452 ± 0.078 | 1.220 ± 0.211 | 0.121 | 0.084 | 0.013 |
Trimethylamine | 4.513 ± 0.212 | 5.007 ± 0.298 | 4.912 ± 0.576 | 0.012 | 0.784 | 0.265 |
Sarcosine | 0.016 ± 0.004 | 0.015 ± 0.003 | 0.021 ± 0.009 | 0.788 | 0.276 | 0.375 |
Dimethylamine | 0.010 ± 0.001 | 0.009 ± 0.001 | 0.013 ± 0.002 | 0.674 | 0.021 | 0.027 |
N,N-Dimethylglycine | 6.994 ± 0.217 | 6.424 ± 0.219 | 5.423 ± 0.443 | 0.002 | 0.001 | 0.000 |
Creatine | 0.046 ± 0.014 | 0.069 ± 0.012 | 0.062 ± 0.022 | 0.022 | 0.702 | 0.224 |
Dimethyl sulfone | 0.034 ± 0.002 | 0.036 ± 0.002 | 0.040 ± 0.005 | 0.401 | 0.186 | 0.088 |
Choline | 0.217 ± 0.023 | 0.216 ± 0.014 | 0.196 ± 0.028 | 0.944 | 0.335 | 0.309 |
Phosphocholine | 0.245 ± 0.035 | 0.279 ± 0.032 | 0.390 ± 0.054 | 0.189 | 0.003 | 0.002 |
Glycerophosphocholine | 0.407 ± 0.036 | 0.325 ± 0.051 | 0.395 ± 0.127 | 0.020 | 0.502 | 0.799 |
Succinic acid | 0.062 ± 0.004 | 0.060 ± 0.004 | 0.060 ± 0.007 | 0.403 | 0.952 | 0.608 |
Betaine | 0.116 ± 0.033 | 0.098 ± 0.031 | 0.076 ± 0.034 | 0.448 | 0.421 | 0.215 |
Trimethylamine N-oxide | 0.236 ± 0.043 | 0.209 ± 0.030 | 0.216 ± 0.083 | 0.225 | 0.884 | 0.567 |
myo-Inositol | 1.022 ± 0.029 | 1.077 ± 0.042 | 1.057 ± 0.065 | 0.027 | 0.587 | 0.343 |
Creatinine | 0.484 ± 0.018 | 0.502 ± 0.022 | 0.472 ± 0.043 | 0.277 | 0.208 | 0.658 |
Ornithine | 8.057 ± 0.245 | 8.080 ± 0.264 | 7.454 ± 0.476 | 0.912 | 0.037 | 0.046 |
SEM means the standard error of the mean, confidence interval.