TABLE 1.
The imaging conditions of individual human oocyte samples.
| FIB settings |
SEM settings |
Dataset characteristics |
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| Maturation stage | Sample ID | FIB-SEM microscope | Imaging time (h) | FIB type | Trench milling (nA) | Slicing (nA) | Detector type | Voltage (kV) | Beam current (pA) | Dwell time (μs/px) | Number of slices | Pixel XY (nm) | Pixel Z (nm) | XY pixel size | XY area (nm) | Z area (nm) |
| GV | MU-59 | Amber X | 39,8 | Xe | 300 | 100 | LE-BSE | 5 | 300 | 32 | 322 | 30 | 90 | 3,165 × 1,452 | 94,950 × 43,650 | 28,980 |
| MU-107 | Solaris X | 43,5 | Xe | 300 | 100 | LE-BSE | 4 | 300 | 32 | 222 | 40 | 100 | 4,224 × 1,674 | 168,960 × 66,960 | 22,200 | |
| MU-158 | Amber | 49,4 | Ga | 50-85 | 20 | LE-BSE | 5 | 500 | 10 | 636 | 30 | 90 | 4,899 × 2,394 | 146,970 × 71,820 | 57,240 | |
| MI | MU-73 | Amber | 89,8 | Ga | 50-85 | 20 | LE-BSE | 5 | 600 | 10 | 1,294 | 30 | 90 | 4,124 × 2,228 | 123,720 × 66,840 | 116,460 |
| MU-75 | Amber | 76,2 | Ga | 50-85 | 20 | LE-BSE | 5 | 300 | 10 | 1,125 | 30 | 90 | 4,416 × 2,622 | 132,480 × 78,660 | 101,250 | |
| MU-77 | Solaris X | 5,3 | Xe | 300 | 100 | LE-BSE | 4 | 300 | 32 | 120 | 40 | 100 | 1,364 × 1,462 | 54,560 × 58,480 | 12,000 | |
| MII | MU-89 | Amber X | 75,3 | Xe | 300 | 100 | LE-BSE | 3 | 400 | 30 | 237 | 30 | 90 | 5,043 × 3,315 | 151,290 × 99,450 | 21,330 |
| MU-108 | Amber X | 22,7 | Xe | 300 | 100 | Axial | 5 | 300 | 32 | 451 | 40 | 100 | 2,461 × 1,715 | 98,440 × 68,600 | 45,100 | |
| MU-113 | Amber X | 55,1 | Xe | 300 | 100 | Axial | 3 | 300 | 19,2 | 494 | 40 | 40 | 3,100 × 2,152 | 124,000 × 86,080 | 19,760 | |