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. 2021 Nov 2;12:751040. doi: 10.3389/fgene.2021.751040

TABLE 3.

Structural dependent modeling parameters for the CBL-CIPK proteins.

Protein C-score TM-score RMSD (Å) Best identified structural analogs in PDB
PDB hit TM-score RMSD IDEN Cov
LjCBL1 −0.68 0.63 ± 0.14 7.0 ± 4.1Å 1uhnA 0.838 0.27 0.931 0.84
LjCBL2 −0.80 0.61 ± 0.14 7.4 ± 4.2Å 1uhnA 0.809 0.61 0.55 0.818
LjCBL3 −0.92 0.60 ± 0.14 7.6 ± 4.3Å 1uhnA 0.835 0.26 0.968 0.836
LjCBL4 −0.62 0.63 ± 0.13 6.9 ± 4.1Å 1uhnA 0.852 0.35 0.582 0.855
LjCBL5 −2.63 0.41 ± 0.14 11.5 ± 4.5Å 1v1gA 0.664 2.43 0.553 0.768
LjCBL6 −0.49 0.65 ± 0.13 6.5 ± 3.9Å 1uhnA 0.885 0.26 0.698 0.887
LjCIPK1 −0.43 0.66 ± 0.13 7.9 ± 4.4Å 6c9dA 0.890 2.14 0.326 0.928
LjCIPK2 −0.87 0.60 ± 0.14 9.1 ± 4.6Å 6c9dA 0.920 0.98 0.270 0.927
LjCIPK3 −2.10 0.46 ± 0.15 12.5 ± 4.3Å 6c9dA 0.803 0.780 0.305 0.807
LjCIPK4 −0.14 0.70 ± 0.12 7.3 ± 4.2Å 6c9dA 0.906 1.140 0.322 0.921
LjCIPK5 0.110 0.73 ± 0.11 6.8 ± 4.0Å 6c9dA 0.906 1.080 0.304 0.917
LjCIPK6 −0.290 0.68 ± 0.12 7.7 ± 4.3Å 6c9dA 0.926 0.750 0.286 0.933
LjCIPK7 0.030 0.72 ± 0.11 6.9 ± 4.1Å 6c9dA 0.933 1.100 0.295 0.947
LjCIPK8 −0.55 0.64 ± 0.13 8.4 ± 4.5Å 6c9dA 0.878 0.990 0.295 0.888
LjCIPK9 −0.26 0.68 ± 0.12 7.6 ± 4.3Å 6c9dA 0.887 1.240 0.322 0.902
LjCIPK10 0.26 0.75 ± 0.10 6.4 ± 3.9Å 6c9dA 0.928 1.12 0.292 0.944
LjCIPK11 −0.440 0.66 ± 0.13 8.0 ± 4.4Å 6c9dA 0.906 1.160 0.305 0.919
LjCIPK12 −1.250 0.56 ± 0.15 10.1 ± 4.6Å 6c9dA 0.862 1.140 0.301 0.876
LjCIPK13 −0.710 0.62 ± 0.14 8.7 ± 4.5Å 6c9dA 0.902 0.990 0.290 0.913
LjCIPK14 −0.670 0.63 ± 0.14 8.1 ± 4.4Å 6c9dA 0.929 1.600 0.285 0.970
LjCIPK15 −1.240 0.56 ± 0.15 9.8 ± 4.6Å 2y94A 0.826 2.750 0.318 0.899
LjCIPK16 −1.880 0.49 ± 0.15 11.8 ± 4.5Å 2y94A 0.816 1.080 0.325 0.829
LjCIPK17 −1.740 0.50 ± 0.15 11.0 ± 4.6Å 6c9dA 0.891 1.150 0.308 0.903