TABLE 3.
Structural dependent modeling parameters for the CBL-CIPK proteins.
| Protein | C-score | TM-score | RMSD (Å) | Best identified structural analogs in PDB | ||||
|---|---|---|---|---|---|---|---|---|
| PDB hit | TM-score | RMSD | IDEN | Cov | ||||
| LjCBL1 | −0.68 | 0.63 ± 0.14 | 7.0 ± 4.1Å | 1uhnA | 0.838 | 0.27 | 0.931 | 0.84 |
| LjCBL2 | −0.80 | 0.61 ± 0.14 | 7.4 ± 4.2Å | 1uhnA | 0.809 | 0.61 | 0.55 | 0.818 |
| LjCBL3 | −0.92 | 0.60 ± 0.14 | 7.6 ± 4.3Å | 1uhnA | 0.835 | 0.26 | 0.968 | 0.836 |
| LjCBL4 | −0.62 | 0.63 ± 0.13 | 6.9 ± 4.1Å | 1uhnA | 0.852 | 0.35 | 0.582 | 0.855 |
| LjCBL5 | −2.63 | 0.41 ± 0.14 | 11.5 ± 4.5Å | 1v1gA | 0.664 | 2.43 | 0.553 | 0.768 |
| LjCBL6 | −0.49 | 0.65 ± 0.13 | 6.5 ± 3.9Å | 1uhnA | 0.885 | 0.26 | 0.698 | 0.887 |
| LjCIPK1 | −0.43 | 0.66 ± 0.13 | 7.9 ± 4.4Å | 6c9dA | 0.890 | 2.14 | 0.326 | 0.928 |
| LjCIPK2 | −0.87 | 0.60 ± 0.14 | 9.1 ± 4.6Å | 6c9dA | 0.920 | 0.98 | 0.270 | 0.927 |
| LjCIPK3 | −2.10 | 0.46 ± 0.15 | 12.5 ± 4.3Å | 6c9dA | 0.803 | 0.780 | 0.305 | 0.807 |
| LjCIPK4 | −0.14 | 0.70 ± 0.12 | 7.3 ± 4.2Å | 6c9dA | 0.906 | 1.140 | 0.322 | 0.921 |
| LjCIPK5 | 0.110 | 0.73 ± 0.11 | 6.8 ± 4.0Å | 6c9dA | 0.906 | 1.080 | 0.304 | 0.917 |
| LjCIPK6 | −0.290 | 0.68 ± 0.12 | 7.7 ± 4.3Å | 6c9dA | 0.926 | 0.750 | 0.286 | 0.933 |
| LjCIPK7 | 0.030 | 0.72 ± 0.11 | 6.9 ± 4.1Å | 6c9dA | 0.933 | 1.100 | 0.295 | 0.947 |
| LjCIPK8 | −0.55 | 0.64 ± 0.13 | 8.4 ± 4.5Å | 6c9dA | 0.878 | 0.990 | 0.295 | 0.888 |
| LjCIPK9 | −0.26 | 0.68 ± 0.12 | 7.6 ± 4.3Å | 6c9dA | 0.887 | 1.240 | 0.322 | 0.902 |
| LjCIPK10 | 0.26 | 0.75 ± 0.10 | 6.4 ± 3.9Å | 6c9dA | 0.928 | 1.12 | 0.292 | 0.944 |
| LjCIPK11 | −0.440 | 0.66 ± 0.13 | 8.0 ± 4.4Å | 6c9dA | 0.906 | 1.160 | 0.305 | 0.919 |
| LjCIPK12 | −1.250 | 0.56 ± 0.15 | 10.1 ± 4.6Å | 6c9dA | 0.862 | 1.140 | 0.301 | 0.876 |
| LjCIPK13 | −0.710 | 0.62 ± 0.14 | 8.7 ± 4.5Å | 6c9dA | 0.902 | 0.990 | 0.290 | 0.913 |
| LjCIPK14 | −0.670 | 0.63 ± 0.14 | 8.1 ± 4.4Å | 6c9dA | 0.929 | 1.600 | 0.285 | 0.970 |
| LjCIPK15 | −1.240 | 0.56 ± 0.15 | 9.8 ± 4.6Å | 2y94A | 0.826 | 2.750 | 0.318 | 0.899 |
| LjCIPK16 | −1.880 | 0.49 ± 0.15 | 11.8 ± 4.5Å | 2y94A | 0.816 | 1.080 | 0.325 | 0.829 |
| LjCIPK17 | −1.740 | 0.50 ± 0.15 | 11.0 ± 4.6Å | 6c9dA | 0.891 | 1.150 | 0.308 | 0.903 |