TABLE 3.

Mean squared error (MSE) of the p-values obtained from different G×E VC tests, compared to the “Truth” p-values. Results are obtained with τ = σ = 1 under H ₀: ν = 0 over N = 1,000 replicates with n = 5,000 observations and L = 100 loci.

	MSE of p-value
SEAGLE	3.49 × 10−4
MAGEE	224.96 × 10−4
OVC	3.49 × 10−4
FastKM	17.88 × 10−4