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. 2021 Oct 29;24(11):103368. doi: 10.1016/j.isci.2021.103368
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Mouse monoclonal anti-Y14 Abcam Cat# ab5828; RRID: AB_2269494
Mouse monoclonal anti-phospho-Histone H2A.X (gH2AX) Sigma-Aldrich Cat# 05-636
Mouse monoclonal anti-beta actin Proteintech Cat# 60008-1-Ig; RRID: AB_2289225
Mouse monoclonal anti-GAPDH Proteintech Cat# 60004-1-Ig; RRID: AB_2107436
Mouse monoclonal anti-cyclin B1 BD Pharmingen Cat# 557149
Rabbit monoclonal anti-phospho-Histone H3 Cell Signaling Technology Cat# 3377; RRID: AB_1549592
Rabbit monoclonal anti-Histone H3 Cell Signaling Technology Cat# 4499; RRID: AB_10544537
Rabbit polyclonal anti-cyclin B2 ABclonal Cat# A3351; RRID: AB_2765068
Rabbit polyclonal anti-vWF Proteintech Cat# 11778-1-AP; RRID: AB_10642840
Rabbit polyclonal anti-p53 Proteintech Cat# 10442-1-AP; RRID: AB_2206609
Rabbit polyclonal anti-p21 Proteintech Cat# 10355-1-AP; RRID: AB_2077682
Rabbit polyclonal anti-p21 (C-19) Santa Cruz Cat# sc-397; RRID: AB_632126
Rabbit polyclonal anti-CDK1 Proteintech Cat# 19532-1-AP; RRID: AB_10638617
Rabbit polyclonal anti-Cdc20 Abcam Cat# ab183479
Rabbit polyclonal anti-Cleaved Caspase-3 (Asp175) Cell Signaling Technology Cat# 9661; RRID: AB_2341188
Rabbit polyclonal anti-Y14 Bethyl Cat# A301-033A; RRID: AB_2300943
Rabbit polyclonal anti-gamma H2AX (p Ser 139) Novus Biologicals Cat# NB100-384; RRID: AB_10002815
Rat Monoclonal anti-Mouse GP-VI EMFRET Analytics Cat# M011-1; RRID: AB_2827531
Rat Monoclonal anti-GP-IX EMFRET Analytics Cat# M051-1; RRID: AB_2827529
Rat anti-Mouse α2bβ3 EMFRET Analytics Cat# M021-1
Rat Monoclonal anti-JON/A EMFRET Analytics Cat# M023-2; RRID: AB_2833084
Rabbit polyclonal anti-Fibrinogen EMFRET Analytics Cat# P140-1
Rabbit Polyclonal anti-vWF EMFRET Analytics Cat# P150-1
Rat anti-Mouse P-selectin EMFRET Analytics Cat# M130-1; RRID: AB_2890922
Rat anti-Mouse CD41 BD Biosciences Cat# 553848; RRID: AB_395085
Rat anti-Mouse IgG BD Biosciences Cat# 554684; RRID: AB_395508
Mouse anti-Human CD41 BD Biosciences Cat# 555466; RRID: AB_395858
Anti-Mouse IgG HRP GE Healthcare Cat# NA931; RRID: AB_772210
Anti-Rabbit IgG HRP GE Healthcare Cat# NA934; RRID: AB_772206

Bacterial and virus strains

Luc-targeting shRNA-expressing lentivirus RNAi Core Facility, Academia Sinica N/A
Y14-targeting shRNA-expressing lentivirus RNAi Core Facility, Academia Sinica N/A
P53-targeting shRNA-expressing lentivirus RNAi Core Facility, Academia Sinica N/A

Chemicals, peptides, and recombinant proteins

PMA Sigma-Aldrich Cat# P1585
Pifithrin-α Sigma-Aldrich Cat# 506132
PAR4 activating peptide Bachem Cat# H6054
Thrombopotein (TPO), Mouse GenScript Cat# Z03175

Critical commercial assays

Click-iTTM EdU Alexa FluorTM 647 Flow Cytometry Assay kit ThermoFisher Scientific Cat# C10340

Deposited data

RNA-seq data This study PRJNA684792

Experimental models: Organisms/strains

Mouse: Pf4-Cre; Rbm8af/f (C57BL/6J strain) This study N/A
Mouse: Pf4-Cre; Rbm8af/f; Trp53f/f (C57BL/6J strain) This study N/A

Oligonucleotides

All primers used in this study were listed in Table S4. This study N/A

Recombinant DNA

Plasmid: pcDNA-FLAG-p53-expression vector (Lu et al., 2017) N/A
Plasmid: pcDNA-FLAG-p53 M133K mutant expression vector This study N/A

Software and algorithms

ImageJ Schneider et al., 2016 http://imagej.nih.gov/ij/
Prism GraphPad https://www.graphpad.com/scientific-software/prism/
Trimmomatic v.0.38 Bolger et al., 2014 http://www.usadellab.org/cms/?page=trimmomatic
HISAT2 Kim et al., 2015; Sahraeian et al., 2017 http://daehwankimlab.github.io/hisat2/
featureCounts Liao et al., 2014 N/A
DESeq2 Love et al., 2014 https://bioconductor.org/packages/release/bioc/html/DESeq2.html
clusterProfiler (3.10.1) Subramanian et al., 2005 https://bioconductor.org/packages/release/bioc/html/clusterProfiler.html

Other

Mendeley data This study https://doi.org/10.17632/ycpm9nyfr2.1