TABLE 2.
Bacterial strains used, growth conditions selected, and known enzymes expressed under the conditions specified
Bacterial strain | Growth substrate/inducer | Relevant enzyme(s) expresseda | Reference(s) |
---|---|---|---|
Pseudomonas putida F1 | l-Arginine | Toluene metabolism enzymes at very low levels | 52 |
Pseudomonas putida F1 | Toluene | Toluene pathway and regulatory proteins | 52 |
Pseudomonas putida F39/D | Toluene | All toluene pathway enzymes with mutation in the diol dehydrogenase (TodD) | 48 |
Escherichia coli K-12b | d-Glucose | NAd | |
Escherichia coli JM109 (pDTG601a) | IPTGc | Toluene dioxygenase | 29 |
Escherichia coli JM109 (pDTG602) | IPTGc | Toluene dioxygenase and diol dehydrogenase | 29 |
Pseudomonas sp. NCIB 9816 | Naphthalene | Naphthalene dioxygenase pathway | 53, 54 |
Pseudomonas sp. NCIB 9816-11 | Naphthalene | Naphthalene enzymes with diol dehydrogenase mutation | 53, 54 |
Burkholderia cepacia G4 | Toluene | Toluene-2-monoxygenase pathway | 55 |
Sphingobium yanoikuyae B1 | Biphenyl | Biphenyl dioxygenase pathway | 56 |
Paraburkholderia xenovorans LB400 | Biphenyl | Biphenyl dioxygenase pathway | 57 |
Based on peer-reviewed references.
No aromatic ring oxygenases known to us induced with E. coli grown on glucose.
IPTG, isopropyl-β-d-1-thiogalactopyranoside; added to induce expression of the specified enzyme(s) indicated.
NA, not applicable.