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. 2021 Nov 16;12(6):e03001-21. doi: 10.1128/mBio.03001-21

TABLE 2.

Bacterial strains used, growth conditions selected, and known enzymes expressed under the conditions specified

Bacterial strain Growth substrate/inducer Relevant enzyme(s) expresseda Reference(s)
Pseudomonas putida F1 l-Arginine Toluene metabolism enzymes at very low levels 52
Pseudomonas putida F1 Toluene Toluene pathway and regulatory proteins 52
Pseudomonas putida F39/D Toluene All toluene pathway enzymes with mutation in the diol dehydrogenase (TodD) 48
Escherichia coli K-12b d-Glucose NAd
Escherichia coli JM109 (pDTG601a) IPTGc Toluene dioxygenase 29
Escherichia coli JM109 (pDTG602) IPTGc Toluene dioxygenase and diol dehydrogenase 29
Pseudomonas sp. NCIB 9816 Naphthalene Naphthalene dioxygenase pathway 53, 54
Pseudomonas sp. NCIB 9816-11 Naphthalene Naphthalene enzymes with diol dehydrogenase mutation 53, 54
Burkholderia cepacia G4 Toluene Toluene-2-monoxygenase pathway 55
Sphingobium yanoikuyae B1 Biphenyl Biphenyl dioxygenase pathway 56
Paraburkholderia xenovorans LB400 Biphenyl Biphenyl dioxygenase pathway 57
a

Based on peer-reviewed references.

b

No aromatic ring oxygenases known to us induced with E. coli grown on glucose.

c

IPTG, isopropyl-β-d-1-thiogalactopyranoside; added to induce expression of the specified enzyme(s) indicated.

d

NA, not applicable.