TABLE 3.
Performance of AMP predictors in an external test set
Predictors | Accuracy | Precision | Sensitivity | Specificity | F1 score | MCC |
---|---|---|---|---|---|---|
PC6/deep learning (our platform) | 0.8850 | 0.9035 | 0.8620 | 0.9080 | 0.8822 | 0.7707 |
Antimicrobial Peptide Scanner vr.2a (embedding layer/deep learning) | 0.8097 | 0.8796 | 0.7717 | 0.8601 | 0.8222 | 0.6256 |
iAMPpredb (SVM) | 0.7367 | 0.7436 | 0.7365 | 0.7368 | 0.7400 | 0.4733 |