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. 2021 Oct 13;10:e70934. doi: 10.7554/eLife.70934

Table 2. Primers and methods used for genotyping.

Allele Method Primer PCR product
bam1-3 PCR bam1-3_F: ctaacgactctccgggagctbam1-3_R: taaggaccacagagatcaggattacLbaI_R: tggttcacgtagtgggccatcg WT amp.: 1208 bpmutant amp.: 998 bp
cle40-2 dCAPS cle40-2_F: GGAGAAACACAAGATACGAAAGCCATGcle40-2_R: ATTGTGATTTGATACCAACTTAAAA Restriction enzyme: AseIWT amp.: 460 + 200 bpmutant amp.: 410 + 200 + 60 bp
cle40-cr1 dCAPS cle40-cr_F: ATGGCGGCGATGAAATACAAcle40-cr_R: GTTACGCTTTGGCATCTTTCC Restriction enzyme: BamHIWT amp.: 750 bpmutant amp.: 491 + 259 bp
cle40-cr2
cle40-cr3
clv1-20 PCR clv1-20_F: TTTGAATAGTGTGTGACCAAATTTGAclv1-20_R: TCCAATGGTAATTCACCGGTGLBa.1: TGGTTCACGTAGTGGGCCATCG WT amp.: 860 bpmutant amp: 1200 bp
clv1-101 PCR clv1-101_F: TTCTCCAAATTCACCAACAGGclv1-101_R: CAACGGAGAAATCCCTAAAGGWiscLox_LT6_R: AATAGCCTTTACTTGAGTTGGCGTAAAAG WT amp.: 1158 bpmutant amp.: 896 bp
wus-7 dCAPS wus-7_F: CCGACCAAGAAAGCGGCAACAwus-7_R: AGACGTTCTTGCCCTGAATCTTT Restriction enzyme: XmnIWT amplification: 216 bpmutant amp.: 193 + 23 bp