Table 3.
Comparison of EZ-SDP executed through Vesicle Viewer with those directly from MD simulations
Parameter | POPC |
POPE:POPS |
dC-POPCout/(POPE:POPS)in |
|||
---|---|---|---|---|---|---|
VVa | MD | VVa | MD | VVa | MD | |
AL (Å2) | 63.9 | 64.3 | 55.6 | 55.5 | 66.9/54.1 | 64.2/55.7 |
DH (Å) | 8.3 | 8.8 | 8.1 | 8.0 | 9.5/7.8 | 8.9/8.0 |
DB (Å) | 39.1 | 38.4 | 41.88 | 42.2 | 18.7/21.7 | 19.3/20.9 |
DHH (Å) | 37.2 | 38.2 | 41.2 | 42.0 | 18.6/20.8 | 19.0/20.8 |
2DC (Å) | 28.79 | 28.8 | 32.8 | 32.9 | 13.8/17.0 | 14.5/16.4 |
Implemented using the Vesicle Viewer online platform.