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. 2021 Sep 24;120(21):4639–4648. doi: 10.1016/j.bpj.2021.09.018

Table 3.

Comparison of EZ-SDP executed through Vesicle Viewer with those directly from MD simulations

Parameter POPC
POPE:POPS
dC-POPCout/(POPE:POPS)in
VVa MD VVa MD VVa MD
AL2) 63.9 64.3 55.6 55.5 66.9/54.1 64.2/55.7
DH (Å) 8.3 8.8 8.1 8.0 9.5/7.8 8.9/8.0
DB (Å) 39.1 38.4 41.88 42.2 18.7/21.7 19.3/20.9
DHH (Å) 37.2 38.2 41.2 42.0 18.6/20.8 19.0/20.8
2DC (Å) 28.79 28.8 32.8 32.9 13.8/17.0 14.5/16.4
a

Implemented using the Vesicle Viewer online platform.