REAGENT or RESOURCE	SOURCE	IDENTIFIER
Antibodies
rabbit polyclonal anti-L. monocytogenes R11	Dramsi et al., 1998	N/A
mouse monoclonal anti-β-actin clone AC-15	Sigma-Aldrich	Cat# A1978, RRID:AB_476692
rabbit monoclonal anti-c-Met	Abcam	Cat# ab51067, RRID:AB_880695
rabbit polyclonal anti-SURF1	Proteintech	Cat# 15379-1-AP, RRID:AB_2239968
rabbit polyclonal anti-Rab11	Invitrogen	Cat# 71-5300, RRID:AB_2533987
rabbit polyclonal anti-Transferrin receptor	Abcam	Cat# ab84036, RRID:AB_10673794
anti-rabbit Alexa Fluor 488	Thermo Fisher Scientific	Cat# A-11034, RRID:AB_2576217
anti-rabbit Alexa Fluor 594	Thermo Fisher Scientific	Cat# A-11012, RRID:AB_2534079
anti-rabbit Alexa Fluor 658	Thermo Fisher Scientific	Cat# A-11011, RRID:AB_143157
Bacterial and virus strains
Listeria monocytogenes EGDe (wt strain)	BUG1600, Institut Pasteur	N/A
Listeria monocytogenes EGDeΔC3Δhpt (strain deleted by lmo1293, lmo0347/8, lmo2695/6 and uhpt)	Grubmüller et al., 2014	N/A
Listeria monocytogenes EGDe-cGFP (wt strain expressing green fluorescent protein)	BUG2538, Institut Pasteur	N/A
Listeria monocytogenes EGD (wt strain)	BUG600, Institut Pasteur	N/A
Listeria monocytogenes EGDΔInlA (InlA deleted strain)	BUG947, Institut Pasteur	N/A
Listeria monocytogenes EGDΔInlB (InlB deleted strain)	BUG1047, Institut Pasteur	N/A
Listeria monocytogenes EGDΔhly (hly deleted strain)	BUG3650, Institut Pasteur	N/A
Listeria monocytogenes EGD-cGFP (wt strain expressing GFP)	BUG2539, Institut Pasteur	N/A
Salmonella enterica serovar typhimurium 12023 GFP (wt strain expressing GFP)	Institut Pasteur	N/A
Shigella flexneri M90T (wt strain)	Centre d’Immunologie de Marseille-Luminy	N/A
Chemicals, peptides, and recombinant proteins
Brain heart infusion (BHI) medium	BD Difco	Cat#237500
McCoy’s 5A medium (Modified)	GIBCO	Cat#26600
McCoy’s 5A medium (Modified) (costum-made based on #26600, GIBCO without glucose and glutamine)	GIBCO	Costum-made
DMEM, no glucose	GIBCO	Cat#11966
D-(+)-Glucose	Sigma-Aldrich	Cat#G8270
D-(+)-Galactose	Sigma-Aldrich	Cat#G0625
L-glutamine	GIBCO	Cat#25030
Non-essential amino acids	GIBCO	Cat#11140
L-sodium pyruvate	GIBCO	Cat#11360
Fetal bovine serum (FBS)	BioWest	Cat#S181G
[U-13C6]glucose (99% labeled)	Sigma-Aldrich	Cat#389374
[U-13C6]galactose (99% labeled)	Sigma-Aldrich	Cat#605379
[U-13C5]glutamine (98% labeled)	Cortecnet	Cat#CC1050P01
Gentamicin	Sigma-Aldrich	Cat#G1397
Penicillin-Streptomycin	GIBCO	Cat#15140-122
Chloramphenicol	Sigma-Aldrich	Cat#C0378
G418	InvivoGen	Cat#108321-42-2
Triton X-100 (TX-100)	Sigma-Aldrich	Cat#11332481001
jetPRIME	Polypus Transfection	Cat#114-01
oligomycin A	Sigma-Aldrich	Cat#75351
carbonyl cyanide p-(tri-fluromethoxy)phenyl-hydrazone (FCCP)	Sigma-Aldrich	Cat#C2920
carbonyl cyanide m-chlorophenyl hydrazone (CCCP)	Sigma-Aldrich	Cat#C2759
rotenone	Sigma-Aldrich	Cat#R8875
antimycin A	Sigma-Aldrich	Cat#A8674
2-Deoxy-D-glucose (2DG)	Sigma-Aldrich	Cat#D6134
dynasore hydrate	Sigma-Aldrich	Cat#D7693
Phalloidin 647	Thermo Fisher Scientific	Cat#A22287
MitoTracker Deep Red	Thermo Fisher Scientific	Cat#M22426
Hoechst 33342	Thermo Fisher Scientific	Cat#62249
NucBlue Live ReadyProbes Reagent	Thermo Fisher Scientific	Cat#R37605
4–20% Mini-PROTEAN TGX Stain-Free Protein Gels	Bio-Rad	Cat#4568096
Critical commercial assays
Protein Assay Dye Reagent Concentrate	Bio-Rad	Cat##5000006
Amersham ECL Prime	Thermo Fisher Scientific	Cat#10308449
Clarity Western ECL substrate	Bio-Rad	Cat# #1705060
ATPlite kit	Perkin-Elmer	Cat#6016943
LIVE/DEAD Fixable Red Dead Cell Staining dye	Thermo Fisher Scientific	Cat# L34971
Deposited data
GC-MS data	this manuscript	XXX
Experimental models: Cell lines
Human: HCT116 wt	ATCC	CCL-247
Human: HCT116 SURF1−/−	this manuscript	N/A
Human: HeLa	ATCC	CCL-2
Human: primary skin fibroblasts EF10 + tel	Tissue repository of the Association Française contre les Myopathies (AFM)	N/A
Human: primary skin fibroblasts KB5 + tel	Tissue repository of the Association Française contre les Myopathies (AFM)	N/A
Oligonucleotides
SURF1 fwd (for CRISPR/Cas9 deletion of SURF1) 5′ caccgCGCCTGGAGGAGCGTCCTCA 3′	this manuscript	N/A
SURF1 rev (for CRISPR/Cas9 deletion of SURF1) 5′ aaacTGAGGACGCTCCTCC AGGCGc 3′	this manuscript	N/A
SURF1 fwd (for complementation of SURF1−/− cells) 5′ gatccccaagctt ggcctgacaggccTCACAC ACCAGGTGTCCCAC 3′	this manuscript	N/A
SURF1 rev (for complementation of SURF1−/− cells) 5′ actaccccaagc tggcctctgagTTGGTACCGAGC TCGGATC 3′	this manuscript	N/A
Recombinant DNA
Plasmid: pSpCas9(BB)-2A-GFP (PX458)	Ran et al., 2013	Addgene plasmid #48138
Plasmid pSpCas9(BB)2A-GFP containing the sgRNA for SURF1	this manuscript	N/A
Plasmid: pcDNA3.1+C-(hSURF1)DYK	GenScript	CloneID OHu20778
Plasmid: pSBbi-Neo	Kowarz et al., 2015	Addgene plasmid #60525
Plasmid pSBbi-Neo-SURF1	this manuscript	N/A
Plasmid: pCMV (CAT)T7-SB100	Mátés et al., 2009	Addgene plasmid #34879
Plasmid: pEGFP-N1	Clontech Laboratories	#6085-1
Plasmid: pC1-EGFP-Rab11bCA	Dr. Matthew Lawrenz, University of Louisville	N/A
Software and algorithms
Prism (version 8)	GraphPad	RRID:SCR_002798
Seahorse Wave (version 2.6.1)	Agilent	RRID:SCR_014526
LabSolutions	Shimadzu	RRID:SCR_018241
MetaMorph (version 7.7.9.0)	Molecular Devices	RRID:SCR_002368
Fiji (version 2.0.0)	ImageJ	RRID:SCR_002285
Image Lab (version 6.0.1)	Bio-Rad	RRID:SCR_014210
FlowJo (version 10)	BD Biosciences	RRID:SCR_008520