Biophysical techniques used to characterise the oligomeric states of molecular chaperones and their interactions with amyloidogenic proteins.
Target | Technique | Experimental information | Ref. |
---|---|---|---|
Molecular chaperone oligomers | SEC | Size distribution | 52, 82 and 83 |
DLS | Hydrodynamic radius | 79–81 | |
FCS | Hydrodynamic radius | 86 and 87 | |
IM-MS | Population distribution and bimolecular structure in the gas phase | 68, 71, 88 and 89 | |
Chaperone–protein interactions | AUC | Molecular weight distribution | 31, 32, 76–78 |
sm-FRET | Interactions between biomolecules in close proximity (1–10 nm) | 37, 38, 84 and 85 | |
NMR |
Solution-state: structure, interactions, and dynamics of biomolecules Solid-state: structure of insoluble biomolecules |
32 and 92–95 | |
Fibril structure and chaperone binding | SAXS & SANS | Low-resolution protein structure in solution | 96 |
Immuno-EM | Structure and location of proteins in cells | 31, 32, 90 | |
Cryo-EM | Structure of biomolecules, including amyloid fibrils and oligomeric proteins | 67 and 91 | |
Chaperone–fibril interactions | QCM | Molecular binding | 50 and 83 |