Geometry Optimization |
quality |
medium |
displacement |
0.5 Å |
algorithms |
smart |
maximum iteration |
500 |
energy convergence |
0.001 kcal/mol |
forcefield |
COMPASS |
force |
0.005 kcal mol–1 Å–1
|
charges |
forcefield assigned |
truncation |
cubic spline |
spline
width |
1.0 Å |
cutoff distance |
12.5 Å |
buffer width |
0.5 Å |
van der Waals
interaction |
atom-based |
electrostatic interaction |
group-based |
Amorphous Cell
Construction |
lattice type |
cubic |
no. of configurations |
10 |
temperature |
298 K |
total density of final configurations |
1.0 g/cc |
Ewald accuracy |
0.001 kcal/mol |
|
|
Blend Module (Mixing
Task) |
cutoff |
12.5 Å |
energy samples |
10 × 106
|
spline width |
1.0 Å |
energy bin width |
2.183 kcal/mol |
algorithm |
smart |
cluster samples |
1000 |
time step |
1.0 fs |
iteration per cluster |
20 |
simulation time |
5.0 ps |
reference temperature |
298 K |
Forcite Module
(Cohesive Energy Density Task) |
quality |
medium |
total simulation time |
5.0 ps |
ensemble |
NVT |
thermostat |
Berendsen |
time step |
1.0 fs |
temperature difference |
10.0 K |
(ii) dissipative particle
dynamics (DPD) simulation |
bead density |
3.0 |
interaction parameter |
25.61 |
no. of beads |
8142 beads |
bead mass |
54 amu |
time step |
254.117 fs |
radius |
3.23 Å in a physical unit |
production run |
5000 steps |
electrostatic interaction |
Ewald summation |
initial velocities |
random configuration |
van der Waals interaction |
bead-based method |
temperature |
298 K (kBT = 1) |
truncation |
cubic spline |
cutoff method |
12.5 Å |
dissipation strength |
0.08854 Å |
spline width |
1.0 Å |
dissipation
radius |
8.0 Å |
buffer width |
0.5 Å |
|
|