Table 1. Accuracy Scores (%) for Classification of Reactions with an External LightGBM Classifier on Top of Projections Based on Difference Fingerprints From the RDKit and BERT FPa.
fingerprint
and descriptors types |
||||
---|---|---|---|---|
perplexity | MorganFP | AtomPairFP | Topological Torsion | BERT FP |
10 | 84.0 | 83.1 | 86.4 | 78.1 |
30 | 83.5 | 82.8 | 85.8 | 77.2 |
100 | 82.9 | 81.3 | 85.1 | 76.0 |
500 | 79.2 | 75.5 | 81.4 | 71.8 |
multi-scale | 84.3 | 83.1 | 87.0 | 77.5 |
A value in bold is the best score. The accuracy scores correspond to models trained for 80 epochs.