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. 2021 Nov 3;6(45):30743–30751. doi: 10.1021/acsomega.1c04778

Table 1. Accuracy Scores (%) for Classification of Reactions with an External LightGBM Classifier on Top of Projections Based on Difference Fingerprints From the RDKit and BERT FPa.

  fingerprint and descriptors types
perplexity MorganFP AtomPairFP Topological Torsion BERT FP
10 84.0 83.1 86.4 78.1
30 83.5 82.8 85.8 77.2
100 82.9 81.3 85.1 76.0
500 79.2 75.5 81.4 71.8
multi-scale 84.3 83.1 87.0 77.5
a

A value in bold is the best score. The accuracy scores correspond to models trained for 80 epochs.