Table 2. Distribution of virus-derived sequences among snail samples.
Sp. | Sample | BPV1a, b | BPV2a | BPV3a | BPV4a | BPVS1 | BPVS6 | BPVS16 | BPVS17 | BPVS33 | BPVS42 | BuGV1a | BuGV2 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BP | 1–3 | 0 | 44,740/263c | 5,781/35 | 1,495/9 | 900 | 863 | 278 | 903 | 42 | 817 | 0 | 0 |
4–6 | 0 | 12,305/72 | 2,713/16 | 1,670/10 | 463 | 1,282 | 1,666 | 642 | 62 | 123 | 0 | 0 | |
7–9 | 0 | 5,468/32 | 926/6 | 2,544/15 | 223 | 74 | 216 | 265 | 5 | 39 | 0 | 0 | |
10–12 | 0 | 2,107/12 | 571/3 | 175/1 | 189 | 72 | 30 | 203 | 793 | 19 | 0 | 0 | |
13–15 | 0 | 28,951/170 | 2,709/16 | 9,222/56 | 1,202 | 744 | 426 | 1,181 | 113 | 1,452 | 0 | 0 | |
16–18 | 0 | 19,084/112 | 2,008/12 | 5,792/35 | 607 | 2,725 | 740 | 781 | 210 | 209 | 0 | 0 | |
19–21 | 0 | 492/6 (#21) | 218/3 | 0 | 0 | 5,150 | 0 | 0 | 667 | 55 | 0 | 0 | |
BuG | 22–24 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 24,622/298 | 134/15 |
Notes:
Sample designations are as described in Table 1.
The distribution of virus-derived sequences is shown for five near-complete and seven partial viral genomes. Sequencing reads were mapped to assembled viral sequences using the MAQ assembly program.
Near full-length genome sequence identified.
Isolated from BP454 sequencing data only (not shown here).
Number of reads mapped/fold-coverage of the assembled genome.