TABLE 1.
Top 30 transcription factors (see the full transcription factor list in Supplementary Table 1).
| Gene symbol | Gene name | TF family | Mean (TPM) | S.E.M. | Rank |
| Ybx1 | Y box protein 1 | CSD | 696.7 | 8.1 | 211 |
| Atf4 | Activating transcription factor 4 | TF_bZIP | 489.0 | 18.8 | 269 |
| Id2 | Inhibitor of DNA binding 2 | bHLH | 374.5 | 17.0 | 328 |
| Hmgb1 | High mobility group box 1 | HMG | 339.6 | 19.4 | 354 |
| Hmga1 | High mobility group AT-hook 1 | HMGI/HMGY | 331.4 | 3.9 | 362 |
| Ddit3 | DNA-damage inducible transcript 3 | TF_bZIP | 326.8 | 7.5 | 365 |
| Glmp | Glycosylated lysosomal membrane protein | NCU-G1 | 296.5 | 13.1 | 397 |
| Csde1 | Cold shock domain containing E1, RNA binding | CSD | 291.0 | 8.5 | 406 |
| Sub1 | SUB1 homolog (S. cerevisiae) | PC4 | 261.5 | 8.5 | 458 |
| Ybx3 | Y box protein 3 | CSD | 252.0 | 2.6 | 477 |
| Tsc22d1 | TSC22 domain family, member 1 | TSC22 | 202.8 | 6.2 | 592 |
| Ssrp1 | Structure specific recognition protein 1 | HMG | 191.3 | 5.6 | 628 |
| Jund | Jun D proto-oncogene | TF_bZIP | 190.8 | 6.7 | 631 |
| Zbtb18 | Zinc finger and BTB domain containing 18 | ZBTB | 181.0 | 12.0 | 666 |
| Cers2 | Ceramide synthase 2 | Homeobox | 169.6 | 6.8 | 718 |
| Hmgb2 | High mobility group box 2 | HMG | 159.0 | 6.4 | 763 |
| Litaf | LPS-induced TN factor | zf-LITAF-like | 147.0 | 4.9 | 822 |
| Gatad1 | GATA zinc finger domain containing 1 | zf-GATA | 139.2 | 2.3 | 877 |
| Smarce1 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 | HMG | 136.5 | 5.3 | 898 |
| Junb | Jun B proto-oncogene | TF_bZIP | 130.5 | 6.1 | 950 |
| Cux1 | Cut-like homeobox 1 | CUT | 126.4 | 2.8 | 979 |
| Bhlhe40 | Basic helix-loop-helix family, member e40 | bHLH | 124.3 | 5.4 | 1,000 |
| Tfdp1 | Transcription factor Dp 1 | E2F | 109.1 | 3.2 | 1,131 |
| Pax8 | Paired box 8 | PAX | 107.5 | 3.0 | 1,152 |
| Gtf3a | General transcription factor III A | zf-C2H2 | 103.7 | 1.7 | 1,198 |
| Zfp91 | Zinc finger protein 91 | zf-C2H2 | 101.8 | 2.9 | 1,222 |
| Hmg20b | High mobility group 20B | HMG | 97.2 | 3.4 | 1,284 |
| Mbd3 | Methyl-CpG binding domain protein 3 | MBD | 96.2 | 3.5 | 1,297 |
| Trp53 | Transformation related protein 53 | P53 | 96.0 | 3.1 | 1,303 |
| Irf7 | Interferon regulatory factor 7 | IRF | 91.1 | 2.5 | 1,379 |
| Atf5 | Activating transcription factor 5 | TF_bZIP | 83.0 | 3.8 | 1,543 |
| Mbd2 | Methyl-CpG binding domain protein 2 | MBD | 81.4 | 3.3 | 1,573 |
| Ncor1 | Nuclear receptor co-repressor 1 | MYB | 80.9 | 4.2 | 1,582 |