Table 5b.
DAVID analysis for genes of SCK-cryopreserved hiPS cells classified under ‘cell adhesion’ with a difference in expression of more than 1.4-fold when compared with DAP-cryopreserved hiPS cells (p < 0.05).
| No. | Category | Term | Count | % | PValue | Genes | List Total | Pop Hits | Pop Total | Fold Enrichment | Bonferroni | Benjamini | FDR |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GOTERM_BP_DIRECT | GO:0007155∼cell adhesion | 4 | 40 | 3.82E-04 | CCL4 PVRL1 SELL TNFAIP6 | 7 | 459 | 16792 | 20.91 | 0.068 | 0.07 | 0.07 |
| 2 | GOTERM_BP_DIRECT | GO:0007157∼heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules | 2 | 20 | 0.02 | PVRL CD209 | 7 | 50 | 16792 | 95.95 | 0.963 | 1 | 1 |
| 3 | GOTERM_BP_DIRECT | GO:0071346∼cellular response to interferon-gamma | 2 | 20 | 0.02 | CCL4 WNT5A | 7 | 57 | 16792 | 84.17 | 0.977 | 1 | 1 |
| 4 | GOTERM_BP_DIRECT | GO:0050729∼positive regulation of inflammatory response | 2 | 20 | 0.03 | CCL4 WNT5A | 7 | 73 | 16792 | 65.72 | 0.992 | 1 | 1 |
| 5 | GOTERM_BP_DIRECT | GO:0046718∼viral entry into host cell | 2 | 20 | 0.03 | PVRL CD209 | 7 | 80 | 16792 | 59.97 | 0.995 | 1 | 1 |
| 6 | INTERPRO | IPR016186:C-type lectin-like | 3 | 30 | 4.60E-04 | CD209 SELL TNFAIP6 | 7 | 104 | 18559 | 76.48 | 0.012 | 0.007 | 0.007 |
| 7 | INTERPRO | IPR016187:C-type lectin fold | 3 | 30 | 5.33E-04 | CD209 SELL TNFAIP6 | 7 | 112 | 18559 | 71.02 | 0.014 | 0.007 | 0.007 |
| 8 | INTERPRO | IPR018378:C-type lectin, conserved site | 2 | 20 | 0.01 | CD209 SELL | 7 | 44 | 18559 | 120.51 | 0.309 | 0.123 | 0.123 |
| 9 | INTERPRO | IPR001304:C-type lectin | 2 | 20 | 0.03 | CD209 SELL | 7 | 89 | 18559 | 59.58 | 0.528 | 0.185 | 0.185 |
| 10 | SMART | SM00034:CLECT | 2 | 20 | 0.05 | CD209 SELL | 7 | 86 | 10057 | 33.41 | 0.433 | 0.553 | 0.553 |