Table 2.
Nuclease detection methods
| Nuclease | Detection method | Reference |
|---|---|---|
| FEN1 | Cancer Profiling Array I | [24] |
| IHC | [24, 25] | |
| semiquantitative reverse transcription-PCR | [25] | |
| APE1 | IHC | [26–29, 33, 39] |
| radioactivity-based or fluorescence- based nuclease activity assay | [20] | |
| ELISA | [30, 34, 36] | |
| liquid chromatography and tandem mass spectrometry with isotope dilution | [31] | |
| genotyping assays and in silico prediction | [32] | |
| RT-qPCR | [35] | |
| qPCR | [37] | |
| PCR | [38] | |
| RFLP | [38] | |
| whole genome gene expression of melanoma tumors, using Illumina DASL approach | [40] | |
| XPF/XPG | IHC | [21, 42, 44] |
| RT-qPCR | [45] | |
| MRN Complex | IHC | [47–50] |
| PCR | [48, 49, 51] | |
| TREX2 | knock out mouse model, IHC, ssDNA and dsDNA degradation assays | [52] |
| SND1 | IHC | [53, 56] |
| chicken chorioallantoic membrane assay, human umbilical vein endothelial cell differentiation assay | [54] | |
| RT-qPCR | [57] | |
| DNaseI | phenotyping conducted on urine samples from participants, using electrophoresis in thin polyacrylamide gel followed by immunoblotting with an antihuman DNaseI antibody | [58, 59] |
| RNaseL | gene sequencing, 5′ nuclease TaqMan® allelic discrimination assay, genotyping using PCR and WAVE DHPLC | [60, 61] |
| enzymatic assay using rRNA as a substrate | [62] | |
| analysis of tumor DNA and genotyping of somatic tissues of patients | [63] | |
| RNaseI | WB, ELISA, and immunoprecipitation | [64, 65] |
| Serum RNase activity | serum RNase enzymatic activity was assayed using two substrates: t-RNA (T) from E. coli MRE 600 and the synthetic polycytidylic acid (poly-C). Elevated serum ribonuclease activity (SRA) was expressed in terms of the amount of bovine serum RNaseA from bovine pancreas in ngeq/ml that yields the same extinction Coeff. at the 260 nm wavelength. | [66] |