Table 2.

SNP markers associated with the tuber yield per plant (TYP) and yam mosaic virus severity score.

Trait	Method	SNP marker	Chr	pos (bp)	QTN effect	LOD score	‘-log10(P)’	r2 (%)	MAF	Genotype for code 1
YMV	pLARmEB	chr03_6338751	3	6338751	-143.86	6.10	6.93	4.68	0.46	T
	pKWmEB	chr05_30671001	5	30671001	-109.57	5.32	6.13	5.96	0.49	A
	pLARmEB	chr10_1116193	10	1116193	206.37	5.24	6.05	3.87	0.26	A
	pLARmEB	chr15_3906069	15	3906069	211.65	6.88	7.74	0.31	0.16	A
	pKWmEB	chr15_3906069	15	3906069	174.41	6.15	6.99	0.33	0.16	A
	pKWmEB	chr16_1482029	16	1482029	-100.04	5.00	5.80	3.29	0.49	T
TYP	mrMLM	chr04_23401186	4	23401186	-0.02	5.07	5.87	3.76	0.45	A
	pLARmEB	chr04_8196378	4	8196378	-0.03	5.42	6.23	0.43	0.17	T
	pLARmEB	chr04_18269860	4	18269860	-0.02	7.23	8.10	1.41	0.48	C
	pKWmEB	chr04_6236404	4	6236404	-0.03	8.14	9.03	5.25	0.25	T
	pLARmEB	chr05_24237388	5	24237388	-0.02	10.88	11.83	1.86	0.45	T
	pKWmEB	chr05_24682916	5	24682916	0.03	10.00	10.94	8.47	0.39	A
	pKWmEB	chr08_7046574	8	7046574	-0.01	5.41	6.23	7.38	0.21	A
	pKWmEB	chr08_10135940	8	10135940	-0.02	5.59	6.41	1.64	0.26	C
	pKWmEB	chr10_1571815	10	1571815	-0.03	6.28	7.12	0.86	0.15	C
	pKWmEB	chr10_1317508	10	1317508	-0.01	6.39	7.24	2.41	0.41	T
	FASTmrMLM	chr13_13467988	13	13467988	-0.02	6.04	6.87	2.93	0.41	T
	FASTmrMLM	chr14_11301309	14	11301309	-0.08	7.04	7.91	1.08	0.11	A
	pLARmEB	chr14_11128124	14	11128124	-0.04	5.19	5.99	1.78	0.15	G
	pLARmEB	chr15_5858214	15	5858214	0.02	5.30	6.10	0.39	0.32	T
	mrMLM	chr17_15363223	17	15363223	-0.06	5.44	6.25	0.01	0.10	T
	pLARmEB	chr17_19041958	17	19041958	-0.02	5.11	5.91	0.16	0.14	C
	pLARmEB	chr19_9446619	19	9446619	-0.03	5.16	5.96	0.70	0.09	G