Table 1 |.

Genetic and genomic lineage tracing tools

Class	Method	Model	Labelling	Analysis	Reference
Genetic	Single-color	One cell-specific recombinase line and one reporter line (mouse)	Constitutive or tamoxifen induction	Microscope	1,2
	Intersectional	Two cell-specific recombinase lines and one reporter line (mouse)	Constitutive or tamoxifen induction	Microscope	9,13,14,17
	3D lineage tracing	Single-color or intersectional lineage tracing mouse model	Constitutive or tamoxifen induction	Optic clearing and Microscope	19,20,21
Genomic	CellTagging	Culture cells	Lentiviral tag transduction	scRNA-seq	23
	Polylox	Cell-specific, inducible Cre line and Rosa26-Polylox knock-in mouse line	Tamoxifen induction	DNA-seq	24
	PolyloxExpress	Cell-specific, inducible Cre line and Rosa26-PolyloxExpress knock-in mouse line	Tamoxifen induction	scRNA-seq	25
	GESTALT	GESTALT barcode transgenic zebrafish	Cas9 protein and sgRNAs injection	DNA-seq	26
	scGESTALT	scGESTALT barcode transgenic zebrafish line and inducible Cas9 zebrafish line	Cas9 protein and sgRNAs injection /Heat shock	scRNA-seq	27
	CARLIN	CARLIN mouse line and rtTA transgenic mouse line (Tet-ON)	Doxycycline	scRNA-seq	28