Table 3.
Database for circRNA prediction
| Online database | Remarks | Reference |
|---|---|---|
| circBase | annotation of circRNAs from the eukaryotic cell | 113 |
| starBase | contains information about different types of RNAs. This tool can be used for the detection of miRNA-circRNA interaction | 97 |
| circlncRNAnet | this tool aims to test in silico hypotheses of ncRNA-based functions by keeping a record of RNA sequencing data | 98 |
| circ2Traits | this online tool gives data about the positions of circRNAs in the genome and associated diseases | 99 |
| DeepBase | this tool provides a platform based on next-generation sequencing for annotation and discovery of ncRNAS | 31 |
| CircInteractome | this tool coordinates circRNA with RBPs | 100 |
| CirCpedia | this database gives information about various human and mouse samples through reverse splicing | 101 |
| circRNADb | this online tool gives information about more than 30,000 exons with circRNA in the human genome | 102 |
| TSCD | this tool helps in the characterization of tissue-specific circRNAs | 103 |