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. 2021 Nov 1;118(45):e2109364118. doi: 10.1073/pnas.2109364118

Table 1.

 X-ray data collection and refinement statistics

Data collection PilV (orthorhombic) PilV (monoclinic)
SSRL beamline SSRL 7-1 SSRL 7-1 SSRL 12-2
Wavelength (Å) 0.976 0.979 0.969
Space group P212121 P212121 C2
Unit-cell parameters
 a, b, c (Å) 21.8, 39.3, 109.6 21.8, 39.3, 109.6 46.3, 21.8, 83.8
 α, β, γ (°) 90, 90, 90 90, 90, 90 90, 104, 90
Resolution (Å) 1.96 1.96 (2.07 to 1.96) 1.41 (1.43 to 1.41)
Solvent content (%) 42.4 42.4 33.8
Molecules/AU* 1 1 1
Total no. of reflections 53,268 (2,538) 52,638 (6,230) 91,105 (4,625)
Unique reflections 7,263 (442) 7,182 (947) 15,424 (772)
Multiplicity 7.3 (5.7) 7.3 (6.6) 5.9 (6.0)
Completeness (%) 98.7 (89.2) 98.8 (94.6) 95.9 (97.0)
≤I/σ(I)≥ 23.9 (5.5) 24.3 (6.9) 12.2 (4.0)
Rmerge (%) 6.6 (28.8) 5.4 (23.7) 10.8 (90.0)
Rpim§ (%) 2.6 (12.9) 2.5 (10.8) 4.3 (0.359)
CC1/2 0.999 (0.981) 0.999 (0.986) 0.997 (0.843)
Wilson B factor (Å2) 17.1 8.8
Refinement and model statistics
 No. of reflections used 7,217 1,5402
 Rwork# 0.185 0.172
 Rfreeǁ 0.255 0.206
RMSD
 Bond lengths (Å) 0.007 0.009
 Bond angles (°) 0.932 1.024
No. of non-H atoms
 Protein 792 835
 Ligand 18 14
 Water oxygens 73 106
Average B factor (Å2)
 Protein atoms 27.1 13.3
 Ligands 46.8 33.5
 Water oxygens 35 22.6
Ramachandran plot
 Favored (%) 100 99
 Allowed (%) 100 0
 Outlier (%) 0 1
 PDB code 5V23 5V0M

*Values in parentheses indicate the highest resolution shell.

AU, asymmetric unit.

Rmerge = ΣhΣi | Ii(h) - <I(h)> | / ΣhΣiIi(h).

§Rpim = Σhkl {1/(Nhkl – 1)} 1/2 Σi | Ii(hkl) - <I(hkl) > | / Σhkl Σi Ii(hkl).

CC1/2.

#Rwork = Σhkl | |Fobs| - |Fcalc| | / Σhkl |Fobs|.

ǁRfree is the cross-validation R factor for 5% of the reflections against which the model was not refined.