Table 2.
Primers used in this study.
| Species | Acc no | Cut C primers | Tm | Product size (bp) | Reference |
|---|---|---|---|---|---|
| Escherichia coli | EFJ62362 | F: AGCGAACTGGGAGCGAAATA R: TACGACCACGGTTGAGGACA |
56 |
421 | This study |
| Escherichia fergusonii | CAQ89502 | '' | '' | ||
| Proteus mirabilis | EEI47333 | F: CTGGCAGAACGTTTAGTTTCA R: TGGATTACCTTCCATTGCG |
58 | 492 | This study |
| Proteus penneri | EEG87333 | '' | '' | ||
| Klebsiella pneumoniae subsp. pneumoniae | ACI10981.1 | F: TCAAGTCGGTCAGCAAGATGAA R: CCGTACGGCTGATGATCTCGTC |
58 | 300 | This study |
| Klebsiella pneumoniae subsp. rhinoscleromatis | EEW38822 | '' | '' | ||
| Klebsiella variicola | ADC60394 | '' | '' | ||
| Klebsiella oxytoca | EHT04374 | ———–G———- ————-A——— |
'' | ||
| Providencia rettgeri | EFE54165 | F: CAGGGCTGATTTTCTCTGGT R: GAATTAAAGTTATGCACCA |
54 | 475 | This study |
| Providencia alcalifaciens | EEB46441 | '' | '' | ||
| Providencia rustigianii | EFB72255 | '' | '' | ||
| Clostridium sporogenes | EDU36695 | F: TCGTGAAGCAGGAGTATGGG R: GTCAACACGTCCTATAGACATACC |
58 | 460 | This study |
| Clostridium tetani | AAO36007 | '' | '' | ||
| Anaerococcus hydrogenalis | EEB36265 | F: GAGTAAGCGTAGAAGATGCTAGAG R: GAAAGTGTTCCATGGCAAAGTC |
56 | 673 | This study |
| Anaerococcus vaginalis | EEU12078 | '' | '' | ||
| Anaerococcus tetradius | EEI82584 | '' | '' | ||
| Clostridium hathewayi | EFC99034 | F: GATGTGGATCACCAGCGAGG R: GCATCATCTTGATGTGGGCG |
58 | 284 | This study |
| Yokenella regensburgi | EHM44496 | F: TGGGTGCGTGATGAACTTGA R: TCCATGCTCAGTGTGTCGAG |
58 | 317 | This study |
| Vibrio furnissii | ADT85554 | F: ACGGTAGAAAGCACAAGCGA R: TGAACGACCTTCCCAGAACG |
54 | 408 | This study |
| Olsenella uli | ADK67430 | F: AGCGAGATGATGTGGGTCAC R: AGCCCATCATGCAGTAGTCG |
56 | 343 | This study |