Table-5.
Genome-wide distribution of virulence factors-associated genes, and their features in PM4, PM7 and Razi_Pm0001 strains.
| Gene | Query Coverage (%) | Query identity (%) | Product |
|---|---|---|---|
| lpxC | 100 | 91 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
| rfaD | 100 | 90 | ADP-L-glycero-D-manno-heptose-6-epimerase |
| galE | 100 | 86 | UDP-glucose 4-epimerase |
| rfaE | 100 | 85 | D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase/D-glycero-beta-D-manno-heptose-7-phosphate kinase |
| yhxB/manB | 98 | 88 | Phosphoglucosamine mutase |
| wecA | 98 | 83 | Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase |
| msbA | 98 | 80 | Lipid A export permease/ATP-binding protein MsbA |
| orfM | 97 | 83 | Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) |
| galU | 96 | 87 | UTP--glucose-1-phosphate uridylyltransferase |
| lpxB | 96 | 81 | Lipid-A-disaccharide synthase |
| kdsA | 94 | 92 | 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase |
| gmhA/lpcA | 94 | 91 | D-sedoheptulose 7-phosphate isomerase |
| rfaF | 91 | 83 | ADP-heptose--lipooligosaccharide heptosyltransferase II |
| msbB | 80 | 80 | Lipid A biosynthesis myristoyltransferase |