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. 2021 Nov 10;11(11):3212. doi: 10.3390/ani11113212
ΔΔCt delta delta cycle threshold
ACAA2 Acetyl-CoA Acyltransferase 2
ACOX2 Acyl-CoA oxidase 2
CCL4 C-C Motif Chemokine Ligand 4
CCL10 C-C Motif Chemokine Ligand 10
CIB2 calcium and integrin binding family member 2
ceRNA competing endogenous RNAs
circRNAs circular RNAs
CXCL10 C-X-C motif chemokine ligand 10
CXCL16 C-X-C motif chemokine ligand 16
DE Differential expression
DERs differentially expressed RNAs
FPKM Fragments per kilobase of exon model per million mapped fragments
GAPDH Glyceraldehyde-3-phosphate dehydrogenase
GO Gene ontology
GPAT Glycerol-3-phosphate ethyltransferase
GPNMB glycoprotein nmb.
GWAS genome-wide association study
HUS1 HUS1 Checkpoint Clamp Component
IMF Intramuscular fat
KEGG Kyoto Encyclopedia of Genes and Genomes
KCNRG Potassium Channel Regulator
lncRNAs long non-coding RNAs
LDM longissimus dorsi muscle
mRNAs message RNA
miRNAs microRNAs
miRNAs microRNAs
MYH7B myosin heavy chain 7B
Novel novel gene
NPPC National Pork Producers Council
PTGs potential target genes
PTPMT1 protein tyrosine phosphatase mitochondrial 1
qRT-PCR Reverse transcription quantitative polymerase chain reaction
QTLs quantitative trait loci
RABL2B RAB, member of ras oncogene family like 2b
RDH16 retinol dehydrogenase 16
rRNAs mitochondrial ribosomal RNAs
SFRP4 secreted frizzled-related protein 4
sRNA small RNA
snRNAs small nuclear RNAs
snoRNA small nucleolar RNA
SPP1 secreted phosphoprotein 1
TGFB3 transforming growth factor beta 3
THBS4 thrombospondin 4
tRNA transfer RNA
MAPK10 mitogen-activated protein kinase 10
JAK1 janus kinase 1
STAT1 signal transducer and activator of transcription 1
TYK2 tyrosine kinase 2
IRF9 interferon regulatory factor 9
FADD fas associated via death domain