Mitophagy: Mitophagy is a specialized form of autophagy in which dysfunctional mitochondria are targeted and engulfed by autophagosomes that fuse with lysosomes to degrade the encapsulated mitochondria. Mitophagy is regulated by a number of different mechanisms, including Pink1/Parkin-mediated pathways and the BNIP3/NIX pathways. (A) When mitochondria are damaged by losing their membrane potential (ΔΨ), PINK1 recruits Parkin from the cytosol to the damaged mitochondria. Here, phosphorylated Parkin ubiquitinates outer membrane mitochondrial proteins, and causes mitochondrial engulfment by binding to LC3 on the isolation membranes that fuse with lysosomes. (B) BNIP3/NIX-mediated mitophagic pathways are activated in cancer cells by hypoxia. Outer mitochondrial membrane proteins, such as BNIP3/NIX, bind to LC3 on the isolated membranes, mediating the sequestration of damaged mitochondria into autophagosomes.