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. 2021 Nov 11;9(11):2333. doi: 10.3390/microorganisms9112333

Table 1.

The binding mode of each ligand with the different residues inside the active site of SmaR protein.

Ligand H-Bonding Hydrophobic Interaction AutoDock Score
Secnidazole Arg 50, Tyr 57, Asp 66 69 Ala32, Ala34, Ile 46, Val 68, Leu 69, Trp 81, Thr110, Val 122, Ser 124, Met 126 −5.3
C4-HSL Arg 50, Trp 53, Asp 66, Thr 110 Val 68, Leu 69, Trp 81, Phe 97, Ala 100, Ile 105, Val 122, Ser 124, Met 126 −6.4