| AAV | adeno-associated virus |
| ACP5 | acid phosphatase 5 |
| ACVIM | American College of Veterinary Internal Medicine |
| ADAMTS-7 | a disintegrin and metalloproteinase with thrombospondin motifs-7 |
| AGEs | advanced glycation end products |
| Ap | alkaline phosphatase |
| APF | autophagy promoting factor |
| APPAT | atherosclerotic plaque pathogenesis associated transcript |
| AR | aortic regurgitation |
| ASD | atrial septal defects |
| ASOs | antisense nucleotides |
| ATF4 | activator transcription factor 4 |
| AUROC | Area Under the Receiver Operating Characteristics |
| AVICS | aortic valve interstitial cells |
| BAV | bicuspid aortic valve |
| BMPs | bone morphogenetic proteins |
| BMP-2 | Bone morphogenetic protein 2 |
| CAIF | cardiac autophagy inhibitory factor |
| CARL | cardiac apoptosis-related lncRNA |
| CAVS | calcific aortic valve stenosis |
| Chast | cardiac hypertrophy-associated transcript |
| CHD | Congenital heart diseases |
| CHRF | cardiac hypertrophy-related factor; |
| CircRIC3 | circular RNA |
| CoA | coarctation of the aorta |
| CPLL | combinatorial peptide ligand library |
| DPP4 | dipeptidyl peptidase-4 |
| EGFR | Epidermal growth factor receptor |
| ESI-MS/MS | electrospray ionization mass spectrometry |
| ETA | endothelin type A |
| FGF | Fibroblast growth factor |
| GAS5 | growth block specificity 5 |
| GATA6 | GATA Binding Protein 6 |
| Giver | growth factor-and proinflammatory cytokine-induced vascular cell-expressed lncRNA |
| Gpx1 | Glutathione Peroxidase 1 |
| HCD | high cholesterol diet |
| HDAC4 | histone deacetylase 4 |
| HIF1A-AS1 | HIF1 alpha-antisense RNA1 |
| HOTAIR | HOX antisense intergenic RNA |
| HOXA2 | Homeobox A2 |
| hVICs | human valvular interstitial cells |
| IGF-1 | insulin-growth factor 1 |
| IS | immune system |
| iTRAQ | Isobaric Tags for Relative and Absolute Quantitation |
| JAK-STAT | Janus kinase-signal transducer and activator of transcription |
| lincRNA-p21 | long intergenic noncoding RNA-p21 |
| LNA | locked nucleic acid MEG3: maternally expressed gene 3 |
| MALAT1 | metastasis-associated lung adenocarcinoma transcript 1 |
| Mhrt | myosin heavy chain associated RNA transcripts |
| MIAT | myocardial infarction–associated transcript |
| miRNA | microRNA |
| MITF | Microphthalmia-associated transcription factor |
| MMPs | Matrix metalloproteinase |
| MMVD | myxomatous mitral valve disease |
| MR | mitral regurgitation |
| MTCR | mitral chordae tendineae rupture |
| MV | mitral valve |
| MVP | mitral valve prolapse |
| NADPH | nicotinamide adenine dinucleotide phosphate |
| Neat1 | nuclear-enriched abundant transcript 1 |
| NRAS | neuroblastoma RAS |
| OC | osteocalcin |
| OPG/RANK/RANKL | osteoprotegerin/receptor activator of nuclear factor-kB and its ligand |
| OPN | Osteopontin |
| OSX | osterix factor |
| Ph | phosphorus |
| PIK3R2 | phosphoinositide-3-kinase regulatory subunit 2 |
| Plekhm1 | pleckstrin homology domain-containing protein family M member 1 |
| PPP3CA | Protein Phosphatase 3 Catalytic Subunit Alpha |
| PPP3R1 | Protein Phosphatase 3 Regulatory Subunit B, Alpha |
| Prdx1 | Peroxiredoxin 1 |
| PTGS 2 | Prostaglandin-Endoperoxide Synthase 2 |
| PVA | pulmonary valve atresia |
| RHD | rheumatic heart disease |
| ROS | reactive oxygen species |
| RT-qPCR | Real-time quantitative PCR |
| Runx2 | RUNX Family Transcription Factor 2 |
| SATB2 | Special AT-rich sequence-binding protein 2 |
| siRNAs | short interfering RNAs |
| SIRT1 | Sirtuin 1 |
| SM | smooth muscle |
| SM22α | smooth muscle 22 alpha |
| SOCS1 | suppressor of cytokine signaling 1 |
| SOD1 | superoxide dismutase 1 |
| SOD2 | superoxide dismutase 2 |
| SRF | serum response factor |
| STAT3 | signal transducer and activator of transcription 3 |
| S1PR1 | Sphingosine-1-Phosphate Receptor 1 |
| TA | tricuspid atresia |
| TAV | tricuspid aortic valve |
| TGFB1 | tumor growth factor-beta 1 |
| TGFBR2 | transforming growth factor beta receptor 2 |
| TIMP-2 | Tissue inhibitor of metalloproteinases 2 |
| TNF-α | Tumor necrosis factor-alpha |
| TOF | tetralogy of Fallot |
| TRPV1 | transient receptor potential vanilloid type 1 |
| TUG1 | taurine upregulated 1 |
| UCA1 | urothelial carcinoma-associated |
| VC | valvular calcification |
| VEGFA | vascular endothelial growth factor alpha |
| VSD | ventricular septal defects |
| VSMCs | vascular smooth muscle cells |
| XIST | X-inactive specific transcript |
| α-SMA | alpha-smooth muscle actin |
| 2D | bi-dimensional |
| 2-OMe | 2-O-methyl |
| 3D | three-dimensional |