Table 1.
Top 20 (10 upregulated and 10 downregulated) DE mRNAs. DE mRNAs were sorted based on p-value and fold change.
| mRNA ID | Location | No. of Exons | Length | Base Mean | LFC | p-Value | Gene |
|---|---|---|---|---|---|---|---|
| TCONS_00027847 | chr16:72054592-72061056 | 7 | 1448 | 3419.94 | Inf | 0.00041 | HP |
| TCONS_00062848 | chr5:150401637-150412936 | 9 | 1681 | 2201.54 | Inf | 0.00058 | CD74 |
| TCONS_00027845 | chr16:72054592-72061056 | 5 | 1271 | 2210.50 | Inf | 0.00058 | HP |
| TCONS_00062849 | chr5:150401637-150412936 | 8 | 1489 | 2166.03 | Inf | 0.00058 | CD74 |
| TCONS_00037794 | chr19:6677835-6720682 | 41 | 5132 | 2131.98 | Inf | 0.00059 | C3 |
| TCONS_00027846 | chr16:72054592-72061056 | 5 | 1271 | 2125.11 | Inf | 0.00060 | HP |
| TCONS_00030302 | chr17:34255277-34257201 | 3 | 747 | 1907.13 | Inf | 0.00067 | CCL2 |
| TCONS_00008098 | chr10:58513144-58831437 | 21 | 5471 | 1317.61 | Inf | 0.00087 | BICC1 |
| TCONS_00062847 | chr5:150401637-150412936 | 6 | 1305 | 1274.15 | Inf | 0.00089 | CD74 |
| TCONS_00005374 | chr1:89052304-89065360 | 11 | 3050 | 1164.10 | Inf | 0.00096 | GBP1 |
| TCONS_00065563 | chr6:27866792-27867581 | 1 | 790 | 301.37 | −12.6 | 8.98 × 10−06 | HIST1H1B |
| TCONS_00028779 | chr16:30104810-30113557 | 10 | 1098 | 105.09 | −Inf | 1.25 × 10−05 | GDPD3 |
| TCONS_00010969 | chr10:128096661-128126204 | 14 | 11,415 | 114.64 | −Inf | 1.44 × 10−05 | MKI67 |
| TCONS_00010970 | chr10:128096661-128126204 | 15 | 12,495 | 119.33 | −Inf | 1.45 × 10−05 | MKI67 |
| TCONS_00012090 | chr11:62270155-62273157 | 3 | 506 | 117.08 | −Inf | 1.80 × 10−05 | SCGB2A2 |
| TCONS_00031424 | chr17:79778178-79787650 | 5 | 4265 | 42.19 | −Inf | 1.84 × 10−05 | CBX2 |
| TCONS_00082965 | chrX:154651972-154653579 | 3 | 764 | 24.78 | −Inf | 1.85 × 10−05 | CTAG2 |
| TCONS_00054384 | chr3:170037947-170085395 | 4 | 2013 | 18.08 | −Inf | 2.11 × 10−05 | GPR160 |
| TCONS_00082964 | chrX:154651972-154653579 | 2 | 993 | 20.37 | −Inf | 2.50 × 10−05 | CTAG2 |
| TCONS_00018204 | chr12:52806543-52814116 | 9 | 2147 | 45.76 | −14.4 | 2.61 × 10−05 | KRT4 |
LFC = log2FoldChange and Inf = Infinite.