Table 1.
Information on the new sequenced strains analyzed in the present study.
| Sample Name | Serotype | fliC Type | Collection Year | Collection Location | Isolation Source | Host | Outbreak ID |
|---|---|---|---|---|---|---|---|
| IZSVe-TV 10380/13/14 | D/C | VI-VII | 2014 | Cervignano del Friuli (UD)–Friuli VG | faeces | Bos taurus | 1 |
| IZSVe-TV 10380/17/14 | D/C | VI-VII | 2014 | Cervignano del Friuli (UD)–Friuli VG | rectum | Bos taurus | 1 |
| IZSVe-TV 10380/18/14 | D/C | VI-VII | 2014 | Cervignano del Friuli (UD)–Friuli VG | colon | Bos taurus | 1 |
| IZSVe-TV 10380/20/14 | D/C | VI-VII | 2014 | Cervignano del Friuli (UD)–Friuli VG | feed | 1 | |
| IZSVe-TV 1585/18/11 | D/C | IV | 2011 | Piove di Sacco (PD)–Veneto | ruminal content | Bos taurus | 2 |
| IZSVe-TV 1585/19/11 | D/C | IV | 2011 | Piove di Sacco (PD)–Veneto | ruminal content | Bos taurus | 2 |
| IZSVe-TV 1671/2/11 | D/C | IV | 2011 | Piove di Sacco (PD)–Veneto | ruminal content | Bos taurus | 2 |
| IZSVe-TV 2454/6/14 | D/C | IV | 2014 | Mansuè (TV)–Veneto | faeces | Bos taurus | 3 |
| IZSVe-TV 2454/7/14 | D/C | IV | 2014 | Mansuè (TV)–Veneto | faeces | Bos taurus | 3 |
| IZSVe-TV 2667/2/14 | D/C | IV | 2014 | Mansuè (TV)–Veneto | drinking water | 3 | |
| IZSVe-TV 2659/1/10 | C/D | I | 2010 | Calvenzano (BG)–Lombardia | intestine content | Gallus gallus | 4 |
| IZSVe-TV 2659/2/10 | C/D | I | 2010 | Calvenzano (BG)–Lombardia | intestine content | Gallus gallus | 4 |
| IZSVe-TV 4879B/20/10 | C/D | I | 2010 | Calvenzano (BG)–Lombardia | rice hulls (litter for chicken) | 4 | |
| IZSVe-TV 3522/4/13 | D/C | IV | 2013 | Trebaseleghe (PD)–Veneto | faeces | Bos taurus | 5 |
| IZSVe-TV 3522/5/13 | D/C | IV | 2013 | Trebaseleghe (PD)–Veneto | faeces | Bos taurus | 5 |
| IZSVe-TV 3524/3/13 | D/C | IV | 2013 | Trebaseleghe (PD)–Veneto | intestine content | Bos taurus | 5 |
| IZSVe-TV 3650/1/13 | C/D | I | 2013 | Caprino Veronese (VR)–Veneto | liver | Gallus gallus | 6 |
| IZSVe-TV 3650/3/13 | C/D | I | 2013 | Caprino Veronese (VR)–Veneto | intestine content | Gallus gallus | 6 |
| IZSVe-TV 4863/2/13 | C/D | I | 2013 | Castelvetro (PC)–Emilia Romagna | gastric content | Phasianus colchicus | 7 |
| IZSVe-TV 4863/4/13 | C/D | I | 2013 | Castelvetro (PC)–Emilia Romagna | gastric content | Phasianus colchicus | 7 |
| IZSVe-TV 5363/4/13 | C/D | I | 2013 | Castelvetro (PC)–Emilia Romagna | intestine content | Phasianus colchicus | 7 |
| IZSVe-TV 5262/1/14 | D/C | IV | 2014 | San Zenone degli Ezzelini (TV)–Veneto | faeces | Bos taurus | 8 |
| IZSVe-TV 5262/6/14 | D/C | IV | 2014 | San Zenone degli Ezzelini (TV)–Veneto | faeces | Bos taurus | 8 |
| IZSVe-TV 5792/11 | C/D | I | 2011 | Volta Mantovana (MN)–Lombardia | rice hulls (litter for chicken) | 9 | |
| IZSVe-TV 8103/09 | C/D | I | 2009 | Volta Mantovana (MN)–Lombardia | intestine content | Gallus gallus | 9 |
| IZSVe-TV 5313/3/14 | C/D | I | 2014 | Agugliaro (VI)–Veneto | intestine content | Gallus gallus | 10 |
| IZSVe-TV 5313/4/14 | C/D | I | 2014 | Agugliaro (VI)–Veneto | intestine content | Gallus gallus | 10 |
| IZSVe-TV 5792/1/15 | C/D | I | 2015 | Castelnovo Bariano (RO)–Veneto | liver | Meleagris gallopavo | 11 |
| IZSVe-TV 5792/2/15 | C/D | I | 2015 | Castelnovo Bariano (RO)–Veneto | intestine content | Meleagris gallopavo | 11 |
| IZSVe-TV 6186/1/16 | C/D | I | 2016 | Muggia (TS)–Friuli VG | intestine content | Anas platyrhynchos | 12 |
| IZSVe-TV 6188/5/16 | C/D | I | 2016 | Muggia (TS)–Friuli VG | intestine content | Anas platyrhynchos | 12 |
| IZSVe-TV 6433/2/13 | C | II | 2013 | Sarentino (BZ)–Trentino AA | faeces | Bos taurus | 13 |
| IZSVe-TV 6433/3/13 | C | II | 2013 | Sarentino (BZ)–Trentino AA | faeces | Bos taurus | 13 |
| IZSVe-TV 6433/4/13 | C | II | 2013 | Sarentino (BZ)–Trentino AA | faeces | Bos taurus | 13 |
| IZSVe-TV 6433/6/13 | C | II | 2013 | Sarentino (BZ)–Trentino AA | feed | 13 | |
| IZSVe-TV 6537/1/13 | C | II | 2013 | Sarentino (BZ)–Trentino AA | ruminal content | Bos taurus | 13 |
| IZSVe-TV 6606L/3/14 | C/D | I | 2014 | Naturno (BZ)–Trentino AA | liver | gallus gallus | 14 |
| IZSVe-TV 6606I/3/14 | C/D | I | 2014 | Naturno (BZ)–Trentino AA | intestine content | gallus gallus | 14 |
| IZSVe-TV 6503/1/13 | C/D | I | 2013 | Montalto di Castro (VT)–Lazio | liver | Phasianus colchicus | 15 |
| IZSVe-TV 7494/7/14 | C/D | I | 2014 | Montalto di Castro (VT)–Lazio | Soil (pheasant farm) | 15 | |
| IZSVe-TV 10018/12 | C | II | 2012 | Scena (BZ)–Trentino AA | hay | 16 | |
| IZSVe-TV 9877/1/12 | C | II | 2012 | Scena (BZ)–Trentino AA | faeces | Bos taurus | 16 |
| IZSVe-TV 9877/3/12 | C | II | 2012 | Scena (BZ)–Trentino AA | faeces | Bos taurus | 16 |
| IZSVe-TV 7573/3/12 | C | II | 2012 | San Lorenzo di Sebato (BZ)–Trentino AA | faeces | Bos taurus | 17 |
| IZSVe-TV 7573/4/12 | C | II | 2012 | San Lorenzo di Sebato (BZ)–Trentino AA | faeces | Bos taurus | 17 |
| IZSVe-TV 1899/2/14 | D/C | IV | 2014 | Levico Terme (TN)–Trentino AA | bovine ruminal content | Bos taurus | 18 |
| IZSVe-TV 3859/5/11 | D/C | IV | 2011 | Galgagnano (MI)–Lombardia | faeces | Bos taurus | 19 |
| IZSVe-TV 4045/5/13 | D/C | IV | 2013 | Bleggio Superiore (TN)–Trentino AA | liver | Bos taurus | 20 |
| IZSVe-TV 5694/2/13 | C/D | I | 2013 | Mogliano Veneto (TV)–Veneto | intestine content | Anas platyrhynchos | 21 |
| IZSVe-TV 5850/15 | C/D | I | 2015 | Correzzola (PD)–Veneto | intestine content | Anas platyrhynchos | 22 |
| IZSVe-TV 6025/15 | D/C | IV | 2015 | Quinto di Treviso (TV)–Veneto | intestine content | Ciconia ciconia | 23 |
| IZSVe-TV 6289/14 | C/D | I | 2014 | Lesina (FG)–Puglia | intestine content | Anas platyrhynchos | 24 |
| IZSVe-TV 6315/2/15 | C/D | I | 2015 | Perugia (PG)–Umbria | intestine content | Anas platyrhynchos | 25 |
| IZSVe-TV 6422/2/14 | C/D | I | 2014 | Cremona (CR)–Lombardia | intestine content | Phasianus colchicus | 26 |
| IZSVe-TV 6660/7/15 | C/D | I | 2015 | San Martino Buonalbergo (VR)–Veneto | intestine content | gallus gallus | 27 |
| IZSVe-TV 7574/5/12 | D/C | IV | 2012 | Stenico (TN)–Trentino AA | faeces | Bos taurus | 28 |
| IZSVe-TV 7608/3/14 | C/D | I | 2014 | Forlì (FC)–Emilia Romagna | intestine content | Gallus gallus | 29 |
| IZSVe-TV 7863/07 | D/C | IV | 2007 | Colle Umberto (TV)–Veneto | faeces | Gallus gallus | 30 |
| IZSVe-TV 900/3/11 | C | II | 2011 | Adria (RO)–Veneto | liver | Bos taurus | 31 |
| IZSVe-TV 9659/15 | C/D | I | 2015 | Polesella (RO)–Veneto | intestine content | Gallus gallus | 32 |