Table 2.
Summary of sequence data generated for the transcriptome and quality filtering.
| Samples | Total Reads | Clean Reads | Mapped Reads | Mapped Rate (%) | Q20 (%) | Q30 (%) | GC (%) |
|---|---|---|---|---|---|---|---|
| NTZF-1 | 72,783,012 | 71,783,716 | 60,458,452 | 84.22 | 98.91 | 96.05 | 43.62 |
| NTZF-2 | 61,925,392 | 60,857,682 | 51,896,692 | 85.28 | 98.91 | 96.06 | 44.95 |
| NTZF-3 | 60,878,020 | 59,726,314 | 51,603,485 | 86.4 | 98.85 | 95.87 | 46.00 |
| PTZF-1 | 69,410,088 | 68,273,094 | 45,753,478 | 67.02 | 98.89 | 96.11 | 53.24 |
| PTZF-2 | 66,557,046 | 65,493,004 | 55,524,220 | 84.78 | 98.92 | 96.13 | 49.44 |
| PTZF-3 | 74,253,266 | 73,041,798 | 61,232,206 | 83.83 | 98.97 | 96.27 | 47.69 |
NTZF, non-treated zebrafish; PTZF, phosmet-treated zebrafish; Q20, Phred quality score 20; Q30, Phred quality score 30; GC, guanine–cytosine.