TABLE 4.
Sequences flanking large deletions observed in pol3-ts1 strain
| Deletion size (bp) | Sequencea | Extent of homology between direct repeats (bases) |
|---|---|---|
| 16 | CATGGAGACAtctactggtggtgacaAAGTTTTCGA | 7 of 8 |
| 18 | ATTTACGTTGGTtcccgtattttatttggtCTATCAAAG | 8 of 11 |
| 18 | CTTCTACATTGGctctctattattcattggACTTTTAGT | 9 of 11 |
| 18 | ATATCTCTGTTTtcctgttcttagctgtttGGATCTTAT | 6 of 6 |
| 38 | TATTTACGTTGGttcc…gaacaagttggCTCCTAAA | 6 of 7 |
| 38 | CGTTGGTTCCCgtat…caagttggctcctAAATTCCT | 8 of 10 |
| 42 | GTTCCATACATtgca…tttggcttacatGGAGACATC | 6 of 7 |
| 49 | GGTGCTGGGGTtacc…gtgcctggggtCCAGGTAT | 7 of 7 |
| 51 | GATTAACGCTGCcttc…tggtgaagctgcAAACCCCA | 7 of 9 |
| 59 | AATGCCCGGCTTggct…gtttcacggcttTTGCACCA | 8 of 10 |
| 99 | CCATACATTGCAGtttt…ctggtgttgcagGCTTTTTT | 6 of 6 |
| 108 | AAAGGTGGTGTTccat…tatcactggtgttGCAGGCTT | 7 of 7 |
| 336 | TGTATTGGTTTTCttgg…taggttgggtttcCTCTTTGAT | 8 of 9 |
a
Deleted sequence is shown in lowercase. Imperfect direct repeats are underlined. Bases that differ within each repeat pair are shown in italics.