tRFs |
1-tRFs [20] |
Cut the 3ʹ end of pre-RNA in the nucleus by RNase Z |
Single-stranded, 16–48nt, with poly-U at the end, without redundant sequences of tRNA, distributed in the nucleus and cytoplasm |
2-tRFs [2] |
Produced under hypoxic conditions from tRNAGlu, tRNAAsp, tRNAGly, and pre-tRNATyr
|
Only four types, containing complete anticodon stem and anticodon loop |
3-tRFs [21] |
From mature tRNA 3ʹ end. Part of 3-tRFs are produced by angiogenin cleaving the TψC loop of tRNA |
Containing RNA polymerase III promoter B box and the CCA sequence, including tRF-3a (18nt) and tRF-3b (22nt) |
5-tRFs [21] |
From mature tRNA 5ʹ end |
Containing RNA polymerase III promoter A box, including tRF-5a (14–16nt), tRF-5b (22–24nt), and tRF-5 c (28–30nt) |
i-tRFs [22] |
From mature tRNA inside |
Starting from the second or more downstream nucleotide at mature tRNA 5ʹ end, spaning the anticodon, and extending to the T-loop farthest |
tiRNA [12,23] |
3ʹ-tiRNA |
Produced by angioge-nin in mammalian cell (RNY1 in yeast) cutting the mature tRNA anticodon loop |
From tRNA 3ʹ end to the cutting position of anticodon loop |
5ʹ-tiRNA |
From tRNA 5ʹ end to the cutting position of anticodon loop |