Table 2.
Sample detection by genotype and viral load.
| Genotype | RT-LAMP | LAMP | RT-PCR | Total samples tested (%) |
|---|---|---|---|---|
| 1 | 25 | 25 | 25 | 26 (26%) |
| 2 | 14 | 14 | 14 | 14 (14%) |
| 3 | 22 | 22 | 21 | 23 (23%) |
| 4 | 21 | 22 | 22 | 22 (22%) |
| 5 | 3 | 3 | 3 | 3 (3%) |
| 6 | 1 | 1 | 1 | 1 (1%) |
| 7 | 1 | 1 | 1 | 1 (1%) |
| Unknown | 9 | 9 | 9 | 10 (10%) |
| Viral load (log10 IU/mL) | Total | 100 | ||
| 1.7–3.95 | 3 | 3 | 2 | 5 (5%) |
| 4.4–4.85 | 12 | 12 | 12 | 12 (12%) |
| 5.2–5.98 | 36 | 37 | 37 | 37 (37%) |
| 6.05–6.97 | 37 | 37 | 37 | 37 (37%) |
| Unknown | 8 | 8 | 8 | 9 (9%) |
| Total | 100 |
Experiments were performed in duplicate and at least one positive replicate was interpreted as a positive result.