Table 1.
Species | Assembled genome size (Mb) | Contig N50 (kb) | Scaffold N50 (kb) | Complete BUSCOs of assembly (%) | Annotated gene numbers | Complete BUSCOs of annotation (%) | Repetitive sequences ratio (%) | Reference |
---|---|---|---|---|---|---|---|---|
Rhododendron ovatum | 549 | 1241 | 41 000 | 95.30 | 41 264 | 96.10 | 44.70 | This study |
Rhododendron simsii | 529 | 2235 | 36 351 | 93.68 | 32 999 | 89.91 | 47.48 | Yang et al. (2020) |
Rhododendron delavayi | 695 | 62 | 638 | 92.80 | 32 938 | 87.40 | 51.77 | Zhang et al. (2017a) |
Rhododendron williamsianum | 532 | 219 | 29 011 | 89.00 | 23 559 | 77.20 | 58.80 | Soza et al. (2019) |
Vaccinium corymbosum | 1680 | 15 | 186 | 95.50 | 32 140 | 97.21 | 44.31 | Colle et al. (2019) |
Actinidia chinensis | 654 | 1430 | 20 000 | 90.80 | 38 202 | 86.33 | 43.42 | Wu et al. (2019) |
Primula vulgaris | 411 | 1 | 295 | 89.92 | 24 000 | 86.23 | 37.03 | Cocker et al. (2018) |
Diospyros lotus | 746 | 1060 | 29 749 | 78.97 | 40 532 | 74.07 | 66.60 | Akagi et al. (2020) |
Camellia sinensis | 2940 | 600 | 167 113 | 90.60 | 50 525 | 90.24 | 86.87 | Xia et al. (2020) |