TABLE 1.
tet(X)-positive strains isolated in this study
| Strain | Species | Gene | Location | Source | Sequencing platform | Genome accession no. |
|---|---|---|---|---|---|---|
| ZJ202 | Empedobacter stercoris | tet(X2) | Chromosome | Fecal, swine farm 1 | Illumina | JABFOQ000000000 |
| ZJ180 | E. stercoris | tet(X2) | Chromosome | Fecal, swine farm 1 | Illumina | JACXZB000000000 |
| ZJ215 | E. stercoris | tet(X2) | Chromosome | Fecal, swine farm 1 | Illumina | JACXZC000000000 |
| ZJ286 | Myroides odoratimimus | tet(X2) | NAa | Soil, swine farm 2 | Illumina | JACXZD000000000 |
| ZJ291 | M. odoratimimus | tet(X2) | NA | Soil, swine farm 2 | Illumina | JACXZE000000000 |
| ZJ295 | M. odoratimimus | tet(X2) | NA | Soil, swine farm 2 | Illumina | JACXZF000000000 |
| AT184 | Acinetobacter towneri | tet(X3) | Plasmid | Fecal, swine farm 1 | Nanopore | JACXZG000000000 |
| ZJ199 | Acinetobacter sp. | tet(X3) | Chromosome | Fecal, swine farm 1 | Nanopore | CP062182 |
| AT200 | A. towneri | tet(X3) | Plasmid | Fecal, swine farm 1 | Illumina | JACXZH000000000 |
| AT216 | A. towneri | tet(X3) | Plasmid | Fecal, swine farm 1 | Illumina | JACXZI000000000 |
| AT217 | A. towneri | tet(X3) | Plasmid | Fecal, swine farm 1 | Illumina | JACXZJ000000000 |
| AT181 | A. towneri | tet(X3) | Plasmid | Fecal, swine farm 1 | Nanopore | JACXZK000000000 |
| AT209 | A. towneri | tet(X3) | Plasmid | Fecal, swine farm 1 | Illumina | JACXZL000000000 |
| AT211 | A. towneri | tet(X3) | Plasmid | Fecal, swine farm 1 | Illumina | JACXZM000000000 |
| AT213 | A. towneri | tet(X3) | Plasmid | Fecal, swine farm 1 | Illumina | JACXZN000000000 |
| AT214 | A. towneri | tet(X3) | Plasmid | Fecal, swine farm 1 | Illumina | JACXZO000000000 |
| AT185 | A. towneri | tet(X6), tet(X6) | Plasmid | Fecal, swine farm 1 | Illumina | JACXZP000000000 |
| AT208 | A. towneri | tet(X6) | Plasmid | Fecal, swine farm 1 | Illumina | JACXZQ000000000 |
| AT232 | A. towneri | tet(X6) | Plasmid | Fecal, swine farm 1 | Nanopore | CP062183-CP062184 |
| AT235 | A. towneri | tet(X6) | Plasmid | Fecal, swine farm 1 | Nanopore | CP062185-CP062186 |
| AT205 | A. towneri | tet(X6) | Plasmid | Fecal, swine farm 1 | Nanopore | CP048014-CP048018 |
| ZJ183 | E. stercoris | tet(X14), tet(X2), tet(X2) | Chromosome | Fecal, swine farm 1 | Nanopore | CP053698-CP053701 |
| ZJ182 | E. stercoris | tet(X14)-tet(X2) | Chromosome | Fecal, swine farm 1 | Illumina | JACXZR000000000 |
a
NA, not available: the location of tet(X) gene cannot be resolved in this genome.