FIGURE 2.
NAT2 is a potential target of vitamin D3 against CRC based on a network pharmacological analysis. (A) Volcano map of 3388 DEGs (including 2,079 upregulated genes and 1,309 downregulated genes) from TCGA. Red: upregulation; green: downregulation; log2 FC: log2 fold change. (B) UpSet plot showing predicted cancer target genes among DEGs by six databases. (C) Venn plot showing 411 predicted vitamin D3 targets from 4 databases. (D) Venn plot showing 29 overlapping targets between vitamin D3– and CRC-related genes. (E) PPI network of drug cancer targets. Pink: overlapping targets; blue: amplified targets. (F) Functionally enriched GO terms and KEGG pathway analysis of the overlapping targets. The bars represent the percentage of associated genes per term. (G,H) The correlation between NAT2 expression and overall survival (G) or disease-free survival (H) in CRC patients from GEPIA.