TABLE 2.
Primers used for PCR amplification or sequencing
| Primera | Sequenceb | Gene | Nucleotide positionsc |
|---|---|---|---|
| EV2 | TCCGGCCCCTGAATGCGGCTAATCC | 5′ NTR | 446–470 |
| EV1 | ACACGGACACCCAAAGTAGTCGGTCC | 5′ NTR | 559–533 |
| 006 | GGCAACTTCCACCACCACC | VP2 | 1197–1179 |
| 011 | GCICCIGAYTGITGICCRAA | 2A | 3408–3389 |
| 012 | ATGTAYGTICCICCIGGIGG | VP1 | 2951–2970 |
| 040 | ATGTAYRTICCIMCIGGIGC | VP1 | 2951–2970 |
| 187 | ACIGCIGYIGARACIGGNCA | VP1 | 2612–2631 |
| 188 | ACIGCIGTIGARACIGGNG | VP1 | 2612–2630 |
| 189 | CARGCIGCIGARACIGGNGC | VP1 | 2612–2631 |
| 222 | CICCIGGIGGIAYRWACAT | VP1 | 2969–2951 |
EV1 and EV2 are from reference 19, 006 is from reference 5, and 011, 012, and 040 are from reference 15.
Sequences are shown 5′ to 3′, using standard IUB nucleotide ambiguity codes. I, deoxyinosine.
Nucleotide sequence coordinates are given relative to the sequence of PV1-Mahoney (GenBank accession no. J02281).