Skip to main content

TABLE 2.

Primers used for PCR amplification or sequencing

Primera Sequenceb Gene Nucleotide positionsc
EV2 TCCGGCCCCTGAATGCGGCTAATCC 5′ NTR 446–470
EV1 ACACGGACACCCAAAGTAGTCGGTCC 5′ NTR 559–533
006 GGCAACTTCCACCACCACC VP2 1197–1179
011 GCICCIGAYTGITGICCRAA 2A 3408–3389
012 ATGTAYGTICCICCIGGIGG VP1 2951–2970
040 ATGTAYRTICCIMCIGGIGC VP1 2951–2970
187 ACIGCIGYIGARACIGGNCA VP1 2612–2631
188 ACIGCIGTIGARACIGGNG VP1 2612–2630
189 CARGCIGCIGARACIGGNGC VP1 2612–2631
222 CICCIGGIGGIAYRWACAT VP1 2969–2951
a

EV1 and EV2 are from reference 19, 006 is from reference 5, and 011, 012, and 040 are from reference 15

b

Sequences are shown 5′ to 3′, using standard IUB nucleotide ambiguity codes. I, deoxyinosine. 

c

Nucleotide sequence coordinates are given relative to the sequence of PV1-Mahoney (GenBank accession no. J02281).