Ionic detergents |
SDS, |
Solubilize cytoplasmic membranes, nucleic membranes and nucleic acids, and dissociate deoxyribonucleic acid (DNA) from protein |
Damage ECM structure and collagen integrity. |
[36,50,51,58,114,115] |
SDC, |
Reduce the contents of glycosaminoglycan (GAG) and growth factors |
Triton X-200 |
|
Non-ionic detergents |
Triton X-100 |
Solubilize cell membranes and dissociate DNA from proteins (especially suitable for cell-derived dECM) without disrupting protein-protein interactions |
Alter the ECM architecture. |
[43,50,51,57,58,107,108,115,116] |
Reduce laminins/fibronectin content. |
Remove cells incompletely |
Zwitterionic detergents |
CHAPS, |
Solubilize cell membranes and dissociate DNA from proteins by disrupting DNA-protein, lipid-lipid, lipid-protein interactions |
Disrupt and dissociate proteins in the ECM |
[100,[117], [118], [119], [120]] |
SB-10, |
SB-16 |
Acids |
Peracetic acid, |
Disrupt cell membranes, solubilize cytoplasmic organelles, induce cell lysis, denature proteins and catalyze hydrolytic degradation of biomolecules |
Damage ECM architecture. |
[76,105,114,121] |
Hydrochloric acid |
Affect intracellular molecules such as GAG |
Bases |
Ammonium hydroxide |
Solubilize cytoplasmic components, disrupt nucleic acids and catalyze hydrolytic degradation of biomolecules |
Influence GAG content, collagen and growth factors. |
[57,61,105] |
Weaken mechanical properties |
Hypertonic solutions |
Sodium chloride |
Rupture cell membranes and lyse cells by osmotic shock |
Difficult to remove DNA remnants |
[42,118] |
Hypotonic solutions |
Tris-HCl |
Induce cell lysis, and detach DNA from proteins |
Difficult to remove DNA remnants |
[116,118,122] |
Organic solvents |
Ethanol, Methanol, Acetones |
Extract the lipid of the ECM and cause tissue dehydration, leading to cell membranes solubilization and cell lysis |
Cross-link and precipitate proteins, including collagen. |
[35,56,73,[123], [124], [125]] |
Chelators |
EDTA, EGTA |
Dissociate cells and ECM by binding divalent metal ions necessary for cell adhesion |
Disrupt protein-protein interactions, and denature proteins in ECM |
[75,118,119,125] |