TABLE 5.
Differentially expressed genes involved in peroxisome metabolism (KEGG: pgu01230) in the Cu-600 and Cu-1000 groups.
| Locus | Gene symbol | Gene description | log2Cu600/Cu0 | log2Cu1000/C0 |
| scaffold1.g1010 | PXA | ATP-binding cassette, subfamily D (ALD), peroxisomal long-chain fatty acid import protein | 0.4229 | –0.14307 |
| scaffold1.g1018 | DECR2 | 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing], peroxisomal | 0.58534 | 0.15645 |
| scaffold1.g1053 | ACOX1 | Acyl-CoA oxidase | 0.24958 | –1.9131 |
| scaffold1.g143 | SOD2 | Superoxide dismutase, Fe–Mn family | –4.3844 | –5.3848 |
| scaffold1.g304 | PEX1 | Peroxin-1 | –0.23685 | –0.52134 |
| scaffold1.g54 | PEX14 | Peroxin-14 | 0.8349 | 0.25489 |
| scaffold1.g563 | SOD2 | Superoxide dismutase, Fe–Mn family | –0.038883 | 0.4982 |
| scaffold1.g566 | ACOX1 | Acyl-CoA oxidase | 0.87157 | 0.25607 |
| scaffold1.g567 | ACOX1 | Acyl-CoA oxidase | 0.62598 | −1.2455 |
| scaffold1.g59 | DECR2 | 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing], peroxisomal | 1.0262 | –1.0562 |
| scaffold1.g632 | PEX6 | Peroxin-6 | –0.18241 | –1.3067 |
| scaffold1.g676 | DAO | D-amino-acid oxidase | 1.1432 | 0.22924 |
| scaffold1.g76 | ECI2 | Delta3-Delta2-enoyl-CoA isomerase | 0.85093 | -0.51584 |
| scaffold2.g123 | PXA | ATP-binding cassette, subfamily D (ALD), peroxisomal long-chain fatty acid import protein | 0.70812 | 0.97567 |
| scaffold2.g314 | PEX19 | Peroxin-19 | 0.21879 | −0.14506 |
| scaffold2.g396 | CAT | Catalase | 0.49006 | 0.010229 |
| scaffold2.g483 | ACSL | Long-chain acyl-CoA synthetase | –0.39113 | 0.027016 |
| scaffold2.g541 | ACSL | Long-chain acyl-CoA synthetase | 0.23803 | 0.95725 |
| scaffold2.g697 | PEX5 | Peroxin-5 | 1.0284 | 1.1581 |
| scaffold2.g76 | PEX7 | Peroxin-7 | 0.5191 | –0.33172 |
| scaffold2.g879 | ECH1 | Delta3,5-Delta2,4-dienoyl-CoA isomerase | 0.4061 | –0.13587 |
| scaffold2.g886 | ACAA1 | Acetyl-CoA acyltransferase 1 | 0.046079 | –0.79773 |
| scaffold2.g925 | ACAA1 | Acetyl-CoA acyltransferase 1 | 1.4234 | 0.94433 |
| scaffold3.g106 | SOD2 | Superoxide dismutase, Fe–Mn family | –0.18127 | 0.26071 |
| scaffold3.g200 | SOD2 | Superoxide dismutase, Fe–Mn family | 0.84481 | –0.96481 |
| scaffold3.g245 | ACSL | Long-chain acyl-CoA synthetase | 0.096248 | –0.15418 |
| scaffold3.g330 | IDH1 | Isocitrate dehydrogenase | 0.96882 | 0.69492 |
| scaffold3.g341 | PXMP4 | Peroxisomal membrane protein 4 | 0.52486 | 0.81484 |
| scaffold3.g447 | AGXT | Alanine-glyoxylate transaminase/serine-glyoxylate transaminase/serine-pyruvate transaminase | –0.26587 | 0.88446 |
| scaffold3.g66 | PEX3 | Peroxin-3 | –0.041963 | –0.0034226 |
| scaffold4.g351 | IDH1 | Isocitrate dehydrogenase | 0.059291 | –0.28133 |
| scaffold5.g380 | CRAT | Carnitine O-acetyltransferase | 0.76987 | 3.0562 |
| scaffold5.g412 | ACSL | Long-chain acyl-CoA synthetase | 0.30298 | –0.70738 |
| scaffold5.g69 | PEX2 | Peroxin-2 | 0.3698 | 0.33352 |
| scaffold6.g113 | PMP34 | Solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17 | –0.17095 | –0.29614 |
| scaffold6.g413 | MVK | Mevalonate kinase | –0.17485 | 0.52333 |
| scaffold6.g427 | AGXT | Alanine-glyoxylate transaminase/serine-glyoxylate transaminase/serine-pyruvate transaminase | 0.23625 | −0.68054 |
| scaffold6.g452 | MPV17 | Protein Mpv17 | -0.25531 | 1.1494 |
| scaffold7.g227 | CRAT | Carnitine O-acetyltransferase | 0.16242 | –0.41137 |
| scaffold7.g387 | CRAT | Carnitine O-acetyltransferase | 0.17573 | –0.4754 |
| scaffold7.g50 | PEX13 | Peroxin-13 | 0.25115 | 0.32138 |
| scaffold7.g73 | CAT | Catalase | 0.41153 | –3.8607 |
| scaffold8.g82 | NUDT12 | NAD + diphosphatase | 0.95423 | 0.72384 |
| scaffold9.g93 | HAO | (S)-2-hydroxy-acid oxidase | 1.6205 | 1.0247 |