REAGENT or RESOURCE	SOURCE	IDENTIFIER
Deposited data
mRNA-seq of 146 PDAC primary tumor patients	The Cancer Genome Atlas	PAAD
microRNA-seq of 146 PDAC primary tumor patients	The Cancer Genome Atlas	PAAD
DNA methylation array of 146 PDAC primary tumor patients	The Cancer Genome Atlas	PAAD
mRNA-seq of 59 PDAC primary tumor patients	International Cancer Genome Consortium	PACA-AU
mRNA microarray of 64 PDAC primary tumor patients	International Cancer Genome Consortium	PACA-AU
DNA methylation array of 57 PDAC primary tumor patients	International Cancer Genome Consortium	PACA-AU
mRNA microarray of 65 PDAC primary tumor patients	Gene Expression Omnibus	GEO: GSE62452
microRNA array of 65 PDAC primary tumor patients	Gene Expression Omnibus	GEO: GSE62498
Software and algorithms
TCGA-Assembler	Zhu et al., 2014	https://github.com/compgenome365/TCGA-Assembler-2
Survival	R Core Team	https://www.R-project.org
Survminer	R Core Team	https://www.R-project.org
biomaRt	Durinck et al., 2009	https://doi.org/10.18129/B9.bioc.biomaRt
Impute	Trevor et al., 2019	https://doi.org/10.18129/B9.bioc.impute
illuminaHumanv4.db	Dunning et al., 2015	https://doi.org/10.18129/B9.bioc.illuminaHumanv4.db
FDb.InfiniumMethylation.hg19	Tim Triche, 2015	https://doi.org/10.18129/B9.bioc.FDb.InfiniumMethylation.hg19
tensorflow 1.15.0	Abadi et al., 2016	https://www.tensorflow.org/
numpy 1.19.5	Harris et al., 2020	https://numpy.org/
scikit-learn 0.23.1	Pedregosa et al., 2011	https://scikit-learn.org/
pandas 1.1.2	McKinney, 2010	https://pandas.pydata.org/
MODEL-P code	This paper	https://github.com/ErasmusMC-Bioinformatics/MODEL-P